RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W BIO5P53744 561 aaKnown RBP5.69□□□□□ -1.5
SNX4YJL036W CPS1P27614 576 aa5.68□□□□□ -1.5
SNX4YJL036W TFA2P36145 328 aa5.68□□□□□ -1.5
SNX4YJL036W LEM3P42838 414 aa5.68□□□□□ -1.5
SNX4YJL036W EMG1Q06287 252 aaKnown RBP5.68□□□□□ -1.5
SNX4YJL036W SOG2Q08817 791 aa5.68□□□□□ -1.5
SNX4YJL036W MSB1P21339 1137 aaKnown RBP5.67□□□□□ -1.5
SNX4YJL036W PUP1P25043 261 aa5.67□□□□□ -1.5
SNX4YJL036W YBR287WP38355 427 aa5.67□□□□□ -1.5
SNX4YJL036W PUN1Q06991 263 aa5.67□□□□□ -1.5
SNX4YJL036W POL5P39985 1022 aaKnown RBP5.66□□□□□ -1.5
SNX4YJL036W NCE103P53615 221 aa5.66□□□□□ -1.5
SNX4YJL036W ALD3P54114 506 aa5.66□□□□□ -1.5
SNX4YJL036W MAE1P36013 669 aaKnown RBP5.65□□□□□ -1.5
SNX4YJL036W FUS1P11710 512 aa5.64□□□□□ -1.51
SNX4YJL036W SRS2P12954 1174 aa5.64□□□□□ -1.51
SNX4YJL036W SEA4P38164 1038 aa5.64□□□□□ -1.51
SNX4YJL036W FIR1P40020 876 aa5.63□□□□□ -1.51
SNX4YJL036W SPO71Q03868 1245 aa5.63□□□□□ -1.51
SNX4YJL036W RNQ1P25367 405 aa5.62□□□□□ -1.51
SNX4YJL036W AIM46P38885 310 aa5.62□□□□□ -1.51
SNX4YJL036W UBP5P39944 805 aa5.62□□□□□ -1.51
SNX4YJL036W HXT8P40886 569 aa5.62□□□□□ -1.51
SNX4YJL036W SDH1Q00711 640 aa5.62□□□□□ -1.51
SNX4YJL036W ELG1Q12050 791 aa5.62□□□□□ -1.51
SNX4YJL036W ERS1P17261 260 aa5.6□□□□□ -1.51
SNX4YJL036W RGD2P43556 714 aa5.6□□□□□ -1.51
SNX4YJL036W CWC15Q03772 175 aaKnown RBP5.6□□□□□ -1.51
SNX4YJL036W KTR2P33550 425 aa5.59□□□□□ -1.51
SNX4YJL036W LRG1P35688 1017 aa5.59□□□□□ -1.51
SNX4YJL036W BOI1P38041 980 aaKnown RBP5.59□□□□□ -1.51
SNX4YJL036W GIC2Q06648 383 aa5.59□□□□□ -1.51
SNX4YJL036W SSA4P22202 642 aaKnown RBP5.58□□□□□ -1.52
SNX4YJL036W RRN6P32786 894 aa5.58□□□□□ -1.52
SNX4YJL036W SEG2P34250 1132 aa5.58□□□□□ -1.52
SNX4YJL036W NEO1P40527 1151 aa5.58□□□□□ -1.52
SNX4YJL036W KIP3P53086 805 aaKnown RBP5.58□□□□□ -1.52
SNX4YJL036W YNR065CP53751 1116 aa5.58□□□□□ -1.52
SNX4YJL036W GCD1P09032 578 aaPredicted RBP5.57□□□□□ -1.52
SNX4YJL036W HVG1P0CE11 249 aa5.57□□□□□ -1.52
SNX4YJL036W NTA1P40354 457 aa5.57□□□□□ -1.52
SNX4YJL036W YJR124CP47159 448 aa5.57□□□□□ -1.52
SNX4YJL036W HAS1Q03532 505 aaKnown RBP5.57□□□□□ -1.52
SNX4YJL036W PNP1Q05788 311 aa5.56□□□□□ -1.52
SNX4YJL036W APC11Q12157 165 aa5.56□□□□□ -1.52
SNX4YJL036W POL12P38121 705 aaPredicted RBP5.55□□□□□ -1.52
SNX4YJL036W YML083CQ04526 418 aa5.55□□□□□ -1.52
SNX4YJL036W NIT1P40447 199 aa5.54□□□□□ -1.52
SNX4YJL036W ECL1P48235 211 aa5.54□□□□□ -1.52
SNX4YJL036W SUT1P53032 299 aaKnown RBP5.54□□□□□ -1.52
SNX4YJL036W NOB1Q08444 459 aaKnown RBP5.54□□□□□ -1.52
SNX4YJL036W GLO4Q12320 285 aa5.54□□□□□ -1.52
SNX4YJL036W FAR11P53917 953 aa5.53□□□□□ -1.52
SNX4YJL036W TIF6Q12522 245 aaKnown RBP5.53□□□□□ -1.52
SNX4YJL036W DFG16Q99234 619 aa5.53□□□□□ -1.52
SNX4YJL036W RAD55P38953 406 aa5.52□□□□□ -1.53
SNX4YJL036W SSA1P10591 642 aaKnown RBP5.51□□□□□ -1.53
SNX4YJL036W SMC1P32908 1225 aa5.51□□□□□ -1.53
SNX4YJL036W FET4P40988 552 aa5.51□□□□□ -1.53
SNX4YJL036W MMM1P41800 426 aa5.51□□□□□ -1.53
SNX4YJL036W LSO1Q3E827 93 aa5.51□□□□□ -1.53
SNX4YJL036W RPB10P22139 70 aa5.5□□□□□ -1.53
SNX4YJL036W PYC2P32327 1180 aaKnown RBP5.5□□□□□ -1.53
SNX4YJL036W IRS4P36115 615 aaKnown RBP5.5□□□□□ -1.53
SNX4YJL036W PSY2P40164 858 aa5.5□□□□□ -1.53
SNX4YJL036W YOR223WQ12015 292 aa5.5□□□□□ -1.53
SNX4YJL036W YCR015CP25616 317 aa5.49□□□□□ -1.53
SNX4YJL036W WHI3P34761 661 aaKnown RBP5.49□□□□□ -1.53
SNX4YJL036W GPT2P36148 743 aa5.49□□□□□ -1.53
SNX4YJL036W CIT3P43635 486 aa5.49□□□□□ -1.53
SNX4YJL036W FUR4P05316 633 aaKnown RBP5.48□□□□□ -1.53
SNX4YJL036W GAS1P22146 559 aaKnown RBP5.48□□□□□ -1.53
SNX4YJL036W GEF1P37020 779 aa5.48□□□□□ -1.53
SNX4YJL036W YML020WQ03722 664 aa5.48□□□□□ -1.53
SNX4YJL036W YMR074CQ04773 145 aa5.48□□□□□ -1.53
SNX4YJL036W NSI1Q12457 570 aa5.48□□□□□ -1.53
SNX4YJL036W YHL008CP38750 627 aa5.47□□□□□ -1.53
SNX4YJL036W PRP43P53131 767 aaKnown RBP5.47□□□□□ -1.53
SNX4YJL036W SUB2Q07478 446 aaKnown RBP5.47□□□□□ -1.53
SNX4YJL036W YKL222CP35995 705 aa5.46□□□□□ -1.54
SNX4YJL036W HSP78P33416 811 aa5.45□□□□□ -1.54
SNX4YJL036W RCM1P53972 490 aa5.45□□□□□ -1.54
SNX4YJL036W DOT1Q04089 582 aaKnown RBP5.45□□□□□ -1.54
SNX4YJL036W YOR059CQ08448 450 aaKnown RBP5.45□□□□□ -1.54
SNX4YJL036W CDA2Q06703 312 aa5.44□□□□□ -1.54
SNX4YJL036W ESC8Q08119 714 aa5.44□□□□□ -1.54
SNX4YJL036W TSA1P34760 196 aaKnown RBP5.43□□□□□ -1.54
SNX4YJL036W OYE3P41816 400 aaPredicted RBP5.43□□□□□ -1.54
SNX4YJL036W YLL054CQ12244 843 aa5.43□□□□□ -1.54
SNX4YJL036W BOL3P39724 118 aa5.42□□□□□ -1.54
SNX4YJL036W GCV1P48015 400 aa5.42□□□□□ -1.54
SNX4YJL036W CTR9P89105 1077 aa5.42□□□□□ -1.54
SNX4YJL036W TAF1P46677 1066 aa5.41□□□□□ -1.54
SNX4YJL036W YIG1Q08956 461 aa5.41□□□□□ -1.54
SNX4YJL036W NOP8Q08287 484 aaPredicted RBP5.4□□□□□ -1.54
SNX4YJL036W COBP00163 385 aa5.39□□□□□ -1.55
SNX4YJL036W RPS4AP0CX35 261 aaKnown RBP5.39□□□□□ -1.55
SNX4YJL036W RPS4BP0CX36 261 aaKnown RBP5.39□□□□□ -1.55
SNX4YJL036W THI80P35202 319 aa5.38□□□□□ -1.55
SNX4YJL036W RIM11P38615 370 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms