RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC4	YGR002C	GPI13	Q07830	1017 aa		4.81	□□□□□ -1.64
SWC4	YGR002C	MNL2	Q12205	849 aa		4.81	□□□□□ -1.64
SWC4	YGR002C	NAR1	P23503	491 aa	Known RBP	4.8	□□□□□ -1.64
SWC4	YGR002C	YNL011C	P53980	444 aa		4.8	□□□□□ -1.64
SWC4	YGR002C	MTC5	Q03897	1148 aa		4.8	□□□□□ -1.64
SWC4	YGR002C	MCX1	P38323	520 aa	Predicted RBP	4.8	□□□□□ -1.64
SWC4	YGR002C	CDC55	Q00362	526 aa		4.8	□□□□□ -1.64
SWC4	YGR002C	HEM3	P28789	327 aa		4.79	□□□□□ -1.64
SWC4	YGR002C	MET4	P32389	672 aa		4.79	□□□□□ -1.64
SWC4	YGR002C	ECM2	P38241	364 aa	Known RBP	4.78	□□□□□ -1.64
SWC4	YGR002C	POL32	P47110	350 aa		4.78	□□□□□ -1.64
SWC4	YGR002C	SOK2	P53438	785 aa	Predicted RBP	4.78	□□□□□ -1.64
SWC4	YGR002C	RSC4	Q02206	625 aa		4.78	□□□□□ -1.64
SWC4	YGR002C	BSC2	Q05611	235 aa		4.78	□□□□□ -1.64
SWC4	YGR002C	INP51	P40559	946 aa	Known RBP	4.77	□□□□□ -1.65
SWC4	YGR002C	FUS1	P11710	512 aa		4.76	□□□□□ -1.65
SWC4	YGR002C	TAT1	P38085	619 aa		4.76	□□□□□ -1.65
SWC4	YGR002C	RRM3	P38766	723 aa		4.76	□□□□□ -1.65
SWC4	YGR002C	TED1	P40533	473 aa		4.76	□□□□□ -1.65
SWC4	YGR002C	LSB3	P43603	459 aa	Known RBP	4.76	□□□□□ -1.65
SWC4	YGR002C	NOC3	Q07896	663 aa	Predicted RBP	4.76	□□□□□ -1.65
SWC4	YGR002C	YDR215C	Q12240	137 aa		4.76	□□□□□ -1.65
SWC4	YGR002C	ATE1	P16639	503 aa		4.75	□□□□□ -1.65
SWC4	YGR002C	PYC2	P32327	1180 aa	Known RBP	4.75	□□□□□ -1.65
SWC4	YGR002C	YHL008C	P38750	627 aa		4.75	□□□□□ -1.65
SWC4	YGR002C	SLN1	P39928	1220 aa	Predicted RBP	4.75	□□□□□ -1.65
SWC4	YGR002C	GIP2	P40036	548 aa		4.75	□□□□□ -1.65
SWC4	YGR002C	PRY1	P47032	299 aa		4.75	□□□□□ -1.65
SWC4	YGR002C	INP54	Q08227	384 aa	Known RBP	4.75	□□□□□ -1.65
SWC4	YGR002C	PHO4	P07270	312 aa	Known RBP	4.74	□□□□□ -1.65
SWC4	YGR002C	SAM37	P50110	327 aa		4.74	□□□□□ -1.65
SWC4	YGR002C	ALD3	P54114	506 aa		4.74	□□□□□ -1.65
SWC4	YGR002C	CTR9	P89105	1077 aa		4.74	□□□□□ -1.65
SWC4	YGR002C	SLP1	Q12232	587 aa		4.74	□□□□□ -1.65
SWC4	YGR002C	COB	P00163	385 aa		4.73	□□□□□ -1.65
SWC4	YGR002C	YCK2	P23292	546 aa	Known RBP	4.73	□□□□□ -1.65
SWC4	YGR002C	GCD6	P32501	712 aa	Known RBP	4.73	□□□□□ -1.65
SWC4	YGR002C	RPT1	P33299	467 aa	Known RBP	4.73	□□□□□ -1.65
SWC4	YGR002C	CIC1	P38779	376 aa	Known RBP	4.73	□□□□□ -1.65
SWC4	YGR002C	SKN7	P38889	622 aa		4.73	□□□□□ -1.65
SWC4	YGR002C	NEO1	P40527	1151 aa		4.73	□□□□□ -1.65
SWC4	YGR002C	DAK2	P43550	591 aa		4.73	□□□□□ -1.65
SWC4	YGR002C	BIO5	P53744	561 aa	Known RBP	4.73	□□□□□ -1.65
SWC4	YGR002C	RRP15	Q06511	250 aa	Predicted RBP	4.72	□□□□□ -1.65
SWC4	YGR002C	GAS5	Q08193	484 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	MCA1	Q08601	432 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	SOG2	Q08817	791 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	FLP1	P03870	423 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	SAC7	P17121	654 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	ASF1	P32447	279 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	TFA2	P36145	328 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	MGE1	P38523	228 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	LEM3	P42838	414 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	CCT8	P47079	568 aa	Known RBP	4.72	□□□□□ -1.65
SWC4	YGR002C	YJR124C	P47159	448 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	GUP1	P53154	560 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	BUD9	P53226	547 aa		4.72	□□□□□ -1.65
SWC4	YGR002C	TY4B-P	A0A0B7P3V8	1104 aa		4.71	□□□□□ -1.66
SWC4	YGR002C	VPS35	P34110	944 aa		4.71	□□□□□ -1.66
SWC4	YGR002C	PAN5	P38787	379 aa		4.71	□□□□□ -1.66
SWC4	YGR002C	MON1	P53129	644 aa		4.71	□□□□□ -1.66
SWC4	YGR002C	DSE4	P53753	1117 aa		4.71	□□□□□ -1.66
SWC4	YGR002C	TY4A-H	Q6Q5P6	413 aa		4.71	□□□□□ -1.66
SWC4	YGR002C	DUR3	P33413	735 aa		4.7	□□□□□ -1.66
SWC4	YGR002C	FET4	P40988	552 aa		4.7	□□□□□ -1.66
SWC4	YGR002C	LSB6	P42951	607 aa		4.7	□□□□□ -1.66
SWC4	YGR002C	OXR1	Q08952	273 aa		4.7	□□□□□ -1.66
SWC4	YGR002C	AI3	P03877	415 aa		4.69	□□□□□ -1.66
SWC4	YGR002C	YNR065C	P53751	1116 aa		4.69	□□□□□ -1.66
SWC4	YGR002C	SPO71	Q03868	1245 aa		4.69	□□□□□ -1.66
SWC4	YGR002C	DAL4	Q04895	635 aa		4.69	□□□□□ -1.66
SWC4	YGR002C	TOS4	Q06266	489 aa		4.69	□□□□□ -1.66
SWC4	YGR002C	GLO4	Q12320	285 aa		4.69	□□□□□ -1.66
SWC4	YGR002C	SBP1	P10080	294 aa	Known RBP	4.68	□□□□□ -1.66
SWC4	YGR002C	RSC6	P25632	483 aa		4.68	□□□□□ -1.66
SWC4	YGR002C	MCM2	P29469	868 aa		4.68	□□□□□ -1.66
SWC4	YGR002C	SEC8	P32855	1065 aa		4.68	□□□□□ -1.66
SWC4	YGR002C	NUT1	P53114	1132 aa		4.68	□□□□□ -1.66
SWC4	YGR002C	OYE2	Q03558	400 aa	Known RBP	4.68	□□□□□ -1.66
SWC4	YGR002C	MSH6	Q03834	1242 aa		4.68	□□□□□ -1.66
SWC4	YGR002C	YCS4	Q06156	1176 aa		4.68	□□□□□ -1.66
SWC4	YGR002C	SFA1	P32771	386 aa		4.67	□□□□□ -1.66
SWC4	YGR002C	UGA4	P32837	571 aa		4.67	□□□□□ -1.66
SWC4	YGR002C	FAA3	P39002	694 aa		4.67	□□□□□ -1.66
SWC4	YGR002C	FYV10	P40492	516 aa		4.67	□□□□□ -1.66
SWC4	YGR002C	YJR107W	P47145	328 aa		4.67	□□□□□ -1.66
SWC4	YGR002C	HAS1	Q03532	505 aa	Known RBP	4.67	□□□□□ -1.66
SWC4	YGR002C	CMR1	Q12510	522 aa	Known RBP	4.67	□□□□□ -1.66
SWC4	YGR002C	MCM5	P29496	775 aa	Known RBP	4.66	□□□□□ -1.66
SWC4	YGR002C	PRP40	P33203	583 aa	Known RBP	4.66	□□□□□ -1.66
SWC4	YGR002C	MAE1	P36013	669 aa	Known RBP	4.66	□□□□□ -1.66
SWC4	YGR002C	AMN1	P38285	549 aa	Predicted RBP	4.66	□□□□□ -1.66
SWC4	YGR002C	RIM11	P38615	370 aa		4.66	□□□□□ -1.66
SWC4	YGR002C	ARI1	P53111	347 aa	Known RBP	4.66	□□□□□ -1.66
SWC4	YGR002C	YPL034W	Q03083	165 aa		4.66	□□□□□ -1.66
SWC4	YGR002C	YMR074C	Q04773	145 aa		4.66	□□□□□ -1.66
SWC4	YGR002C	SPR28	Q04921	423 aa		4.66	□□□□□ -1.66
SWC4	YGR002C	ELG1	Q12050	791 aa		4.66	□□□□□ -1.66
SWC4	YGR002C	NPR1	P22211	790 aa		4.65	□□□□□ -1.66
SWC4	YGR002C	RPS26A	P39938	119 aa	Known RBP	4.65	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms