RNA–Protein interactions for RNA: YDR439W

LRS4, Transcript of Nucleolar protein that forms a complex with Csm1p, yeast

Gene LRS4, Length 1,044 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRS4	YDR439W	SOG2	Q08817	791 aa		5.97	□□□□□ -1.45
LRS4	YDR439W	SRS2	P12954	1174 aa		5.96	□□□□□ -1.46
LRS4	YDR439W	CPS1	P27614	576 aa		5.96	□□□□□ -1.46
LRS4	YDR439W	FIR1	P40020	876 aa		5.96	□□□□□ -1.46
LRS4	YDR439W	SPO74	P45819	413 aa		5.96	□□□□□ -1.46
LRS4	YDR439W	AOS1	Q06624	347 aa		5.96	□□□□□ -1.46
LRS4	YDR439W	MAG2	Q06436	670 aa	Known RBP	5.95	□□□□□ -1.46
LRS4	YDR439W	CYC7	P00045	113 aa		5.94	□□□□□ -1.46
LRS4	YDR439W	HXT8	P40886	569 aa		5.94	□□□□□ -1.46
LRS4	YDR439W	ELM1	P32801	640 aa		5.93	□□□□□ -1.46
LRS4	YDR439W	MAE1	P36013	669 aa	Known RBP	5.93	□□□□□ -1.46
LRS4	YDR439W	TFA2	P36145	328 aa		5.93	□□□□□ -1.46
LRS4	YDR439W	AIM46	P38885	310 aa		5.93	□□□□□ -1.46
LRS4	YDR439W	POL5	P39985	1022 aa	Known RBP	5.93	□□□□□ -1.46
LRS4	YDR439W	ALD3	P54114	506 aa		5.93	□□□□□ -1.46
LRS4	YDR439W	FUS1	P11710	512 aa		5.92	□□□□□ -1.46
LRS4	YDR439W	MSB1	P21339	1137 aa	Known RBP	5.92	□□□□□ -1.46
LRS4	YDR439W	NCE103	P53615	221 aa		5.92	□□□□□ -1.46
LRS4	YDR439W	SPO71	Q03868	1245 aa		5.92	□□□□□ -1.46
LRS4	YDR439W	RLF2	Q12495	606 aa		5.92	□□□□□ -1.46
LRS4	YDR439W	CWC15	Q03772	175 aa	Known RBP	5.91	□□□□□ -1.46
LRS4	YDR439W	RGD2	P43556	714 aa		5.9	□□□□□ -1.46
LRS4	YDR439W	NTA1	P40354	457 aa		5.89	□□□□□ -1.47
LRS4	YDR439W	ELG1	Q12050	791 aa		5.89	□□□□□ -1.47
LRS4	YDR439W	RRN6	P32786	894 aa		5.88	□□□□□ -1.47
LRS4	YDR439W	APC11	Q12157	165 aa		5.88	□□□□□ -1.47
LRS4	YDR439W	KTR2	P33550	425 aa		5.86	□□□□□ -1.47
LRS4	YDR439W	BOI1	P38041	980 aa	Known RBP	5.86	□□□□□ -1.47
LRS4	YDR439W	NEO1	P40527	1151 aa		5.86	□□□□□ -1.47
LRS4	YDR439W	YJR124C	P47159	448 aa		5.86	□□□□□ -1.47
LRS4	YDR439W	PNP1	Q05788	311 aa		5.86	□□□□□ -1.47
LRS4	YDR439W	SUT1	P53032	299 aa	Known RBP	5.85	□□□□□ -1.47
LRS4	YDR439W	YNR065C	P53751	1116 aa		5.85	□□□□□ -1.47
LRS4	YDR439W	GIC2	Q06648	383 aa		5.85	□□□□□ -1.47
LRS4	YDR439W	HVG1	P0CE11	249 aa		5.84	□□□□□ -1.47
LRS4	YDR439W	ERS1	P17261	260 aa		5.84	□□□□□ -1.47
LRS4	YDR439W	RAD55	P38953	406 aa		5.84	□□□□□ -1.47
LRS4	YDR439W	HAS1	Q03532	505 aa	Known RBP	5.84	□□□□□ -1.47
LRS4	YDR439W	YML083C	Q04526	418 aa		5.84	□□□□□ -1.47
LRS4	YDR439W	IRS4	P36115	615 aa	Known RBP	5.83	□□□□□ -1.48
LRS4	YDR439W	KIP3	P53086	805 aa	Known RBP	5.83	□□□□□ -1.48
LRS4	YDR439W	FAR11	P53917	953 aa		5.83	□□□□□ -1.48
LRS4	YDR439W	GLO4	Q12320	285 aa		5.83	□□□□□ -1.48
LRS4	YDR439W	TIF6	Q12522	245 aa	Known RBP	5.83	□□□□□ -1.48
LRS4	YDR439W	SSA4	P22202	642 aa	Known RBP	5.82	□□□□□ -1.48
LRS4	YDR439W	SMC1	P32908	1225 aa		5.82	□□□□□ -1.48
LRS4	YDR439W	UBP5	P39944	805 aa		5.82	□□□□□ -1.48
LRS4	YDR439W	LSO1	Q3E827	93 aa		5.82	□□□□□ -1.48
LRS4	YDR439W	PSY2	P40164	858 aa		5.81	□□□□□ -1.48
LRS4	YDR439W	SDH1	Q00711	640 aa		5.81	□□□□□ -1.48
LRS4	YDR439W	NOB1	Q08444	459 aa	Known RBP	5.81	□□□□□ -1.48
LRS4	YDR439W	RPB10	P22139	70 aa		5.8	□□□□□ -1.48
LRS4	YDR439W	SEA4	P38164	1038 aa		5.8	□□□□□ -1.48
LRS4	YDR439W	FET4	P40988	552 aa		5.8	□□□□□ -1.48
LRS4	YDR439W	PYC2	P32327	1180 aa	Known RBP	5.79	□□□□□ -1.48
LRS4	YDR439W	GCD1	P09032	578 aa	Predicted RBP	5.78	□□□□□ -1.48
LRS4	YDR439W	RNQ1	P25367	405 aa		5.78	□□□□□ -1.48
LRS4	YDR439W	ECL1	P48235	211 aa		5.78	□□□□□ -1.48
LRS4	YDR439W	YOR223W	Q12015	292 aa		5.78	□□□□□ -1.48
LRS4	YDR439W	SEG2	P34250	1132 aa		5.77	□□□□□ -1.49
LRS4	YDR439W	LRG1	P35688	1017 aa		5.77	□□□□□ -1.49
LRS4	YDR439W	MMM1	P41800	426 aa		5.77	□□□□□ -1.49
LRS4	YDR439W	NSI1	Q12457	570 aa		5.77	□□□□□ -1.49
LRS4	YDR439W	FUR4	P05316	633 aa	Known RBP	5.76	□□□□□ -1.49
LRS4	YDR439W	POL12	P38121	705 aa	Predicted RBP	5.76	□□□□□ -1.49
LRS4	YDR439W	NIT1	P40447	199 aa		5.76	□□□□□ -1.49
LRS4	YDR439W	CIT3	P43635	486 aa		5.76	□□□□□ -1.49
LRS4	YDR439W	YMR074C	Q04773	145 aa		5.76	□□□□□ -1.49
LRS4	YDR439W	YLL054C	Q12244	843 aa		5.76	□□□□□ -1.49
LRS4	YDR439W	DFG16	Q99234	619 aa		5.75	□□□□□ -1.49
LRS4	YDR439W	GPT2	P36148	743 aa		5.74	□□□□□ -1.49
LRS4	YDR439W	YOR059C	Q08448	450 aa	Known RBP	5.74	□□□□□ -1.49
LRS4	YDR439W	WHI3	P34761	661 aa	Known RBP	5.73	□□□□□ -1.49
LRS4	YDR439W	GCV1	P48015	400 aa		5.73	□□□□□ -1.49
LRS4	YDR439W	BOL3	P39724	118 aa		5.72	□□□□□ -1.49
LRS4	YDR439W	RCM1	P53972	490 aa		5.72	□□□□□ -1.49
LRS4	YDR439W	DOT1	Q04089	582 aa	Known RBP	5.72	□□□□□ -1.49
LRS4	YDR439W	CTR9	P89105	1077 aa		5.71	□□□□□ -1.5
LRS4	YDR439W	PRP43	P53131	767 aa	Known RBP	5.7	□□□□□ -1.5
LRS4	YDR439W	YIG1	Q08956	461 aa		5.7	□□□□□ -1.5
LRS4	YDR439W	YHL008C	P38750	627 aa		5.69	□□□□□ -1.5
LRS4	YDR439W	GAS1	P22146	559 aa	Known RBP	5.68	□□□□□ -1.5
LRS4	YDR439W	HSP78	P33416	811 aa		5.68	□□□□□ -1.5
LRS4	YDR439W	RIM11	P38615	370 aa		5.68	□□□□□ -1.5
LRS4	YDR439W	HTS1	P07263	546 aa	Known RBP	5.67	□□□□□ -1.5
LRS4	YDR439W	NPR1	P22211	790 aa		5.67	□□□□□ -1.5
LRS4	YDR439W	ECM2	P38241	364 aa	Known RBP	5.67	□□□□□ -1.5
LRS4	YDR439W	OYE3	P41816	400 aa	Predicted RBP	5.67	□□□□□ -1.5
LRS4	YDR439W	RSC4	Q02206	625 aa		5.67	□□□□□ -1.5
LRS4	YDR439W	RPS4A	P0CX35	261 aa	Known RBP	5.66	□□□□□ -1.5
LRS4	YDR439W	RPS4B	P0CX36	261 aa	Known RBP	5.66	□□□□□ -1.5
LRS4	YDR439W	PRP5	P21372	849 aa	Predicted RBP	5.66	□□□□□ -1.5
LRS4	YDR439W	YCR015C	P25616	317 aa		5.66	□□□□□ -1.5
LRS4	YDR439W	UFD2	P54860	961 aa		5.66	□□□□□ -1.5
LRS4	YDR439W	MEC3	Q02574	474 aa		5.66	□□□□□ -1.5
LRS4	YDR439W	CMR1	Q12510	522 aa	Known RBP	5.66	□□□□□ -1.5
LRS4	YDR439W	COB	P00163	385 aa		5.65	□□□□□ -1.5
LRS4	YDR439W	ORC3	P54790	616 aa		5.65	□□□□□ -1.5
LRS4	YDR439W	ADP1	P25371	1049 aa		5.64	□□□□□ -1.51
LRS4	YDR439W	TSA1	P34760	196 aa	Known RBP	5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms