RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	RRP8	P38961	392 aa	Known RBP	4.94	□□□□□ -1.62
SIP1	YDR422C	UFD2	P54860	961 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	SWI5	P08153	709 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	HXT13	P39924	564 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	TGL3	P40308	642 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	HXT17	P53631	564 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	HXT15	P54854	567 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	NAN1	Q02931	896 aa	Known RBP	4.93	□□□□□ -1.62
SIP1	YDR422C	SPO20	Q04359	397 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	HIR1	P32479	840 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	GCD6	P32501	712 aa	Known RBP	4.93	□□□□□ -1.62
SIP1	YDR422C	RGD2	P43556	714 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	BDP1	P46678	594 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	YPL109C	Q02981	657 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	CEF1	Q03654	590 aa	Predicted RBP	4.93	□□□□□ -1.62
SIP1	YDR422C	ATG16	Q03818	150 aa		4.93	□□□□□ -1.62
SIP1	YDR422C	RLP24	Q07915	199 aa	Known RBP	4.93	□□□□□ -1.62
SIP1	YDR422C	CYT1	P07143	309 aa		4.92	□□□□□ -1.62
SIP1	YDR422C	RAM1	P22007	431 aa		4.92	□□□□□ -1.62
SIP1	YDR422C	VPS27	P40343	622 aa	Known RBP	4.92	□□□□□ -1.62
SIP1	YDR422C	SEC26	P41810	973 aa	Known RBP	4.92	□□□□□ -1.62
SIP1	YDR422C	DPL1	Q05567	589 aa		4.92	□□□□□ -1.62
SIP1	YDR422C	RPS6A	P0CX37	236 aa	Known RBP	4.92	□□□□□ -1.62
SIP1	YDR422C	RPS6B	P0CX38	236 aa	Predicted RBP	4.92	□□□□□ -1.62
SIP1	YDR422C	MCM5	P29496	775 aa	Known RBP	4.92	□□□□□ -1.62
SIP1	YDR422C	EXO84	P38261	753 aa		4.92	□□□□□ -1.62
SIP1	YDR422C	YDR344C	Q05510	147 aa		4.92	□□□□□ -1.62
SIP1	YDR422C	YPQ2	Q06328	317 aa		4.92	□□□□□ -1.62
SIP1	YDR422C	FAF1	P40546	346 aa	Predicted RBP	4.91	□□□□□ -1.62
SIP1	YDR422C	APP1	P53933	587 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	MTC5	Q03897	1148 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	HIF1	Q12373	385 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	MPD2	Q99316	277 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	MRPL33	P20084	86 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SIP1	YDR422C	SUT1	P53032	299 aa	Known RBP	4.91	□□□□□ -1.62
SIP1	YDR422C	CWC24	P53769	259 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	ENT2	Q05785	613 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	FMP25	Q08023	583 aa		4.91	□□□□□ -1.62
SIP1	YDR422C	MRF1	P30775	413 aa	Predicted RBP	4.9	□□□□□ -1.62
SIP1	YDR422C	DAL4	Q04895	635 aa		4.9	□□□□□ -1.62
SIP1	YDR422C	RRI2	Q12348	645 aa		4.9	□□□□□ -1.62
SIP1	YDR422C	ATP4	P05626	244 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	PLC1	P32383	869 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	MAL31	P38156	614 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	YBR071W	P38243	211 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	NIT1	P40447	199 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	YGR237C	P50089	785 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	YGR125W	P53273	1036 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	INP54	Q08227	384 aa	Known RBP	4.89	□□□□□ -1.63
SIP1	YDR422C	ERP4	Q12450	207 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	EUG1	P32474	517 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	NOC2	P39744	710 aa	Known RBP	4.89	□□□□□ -1.63
SIP1	YDR422C	RPT2	P40327	437 aa	Known RBP	4.89	□□□□□ -1.63
SIP1	YDR422C	ELP4	Q02884	456 aa	Known RBP	4.89	□□□□□ -1.63
SIP1	YDR422C	TFB2	Q02939	513 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	BSC2	Q05611	235 aa		4.89	□□□□□ -1.63
SIP1	YDR422C	PRP40	P33203	583 aa	Known RBP	4.88	□□□□□ -1.63
SIP1	YDR422C	YHL008C	P38750	627 aa		4.88	□□□□□ -1.63
SIP1	YDR422C	PEX21	P50091	288 aa		4.88	□□□□□ -1.63
SIP1	YDR422C	YNL165W	P53891	406 aa		4.88	□□□□□ -1.63
SIP1	YDR422C	MOD5	P07884	428 aa		4.88	□□□□□ -1.63
SIP1	YDR422C	NOC3	Q07896	663 aa	Predicted RBP	4.88	□□□□□ -1.63
SIP1	YDR422C	YOL087C	Q99247	1116 aa		4.88	□□□□□ -1.63
SIP1	YDR422C	PTC4	P38089	393 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	TBF1	Q02457	562 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	BUD20	Q08004	166 aa	Predicted RBP	4.87	□□□□□ -1.63
SIP1	YDR422C	TIF6	Q12522	245 aa	Known RBP	4.87	□□□□□ -1.63
SIP1	YDR422C	TAF13	P11747	167 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	KIP2	P28743	706 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	RPN12	P32496	274 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	ATG3	P40344	310 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	YJR115W	P47152	169 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	ULP1	Q02724	621 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	THI73	Q07904	523 aa		4.87	□□□□□ -1.63
SIP1	YDR422C	FLP1	P03870	423 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	GAL1	P04385	528 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	SST2	P11972	698 aa	Known RBP	4.86	□□□□□ -1.63
SIP1	YDR422C	PGI1	P12709	554 aa	Known RBP	4.86	□□□□□ -1.63
SIP1	YDR422C	VMA3	P25515	160 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	ABD1	P32783	436 aa	Predicted RBP	4.86	□□□□□ -1.63
SIP1	YDR422C	VBA5	P36172	582 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	EMW1	P42842	904 aa	Known RBP	4.86	□□□□□ -1.63
SIP1	YDR422C	SAM37	P50110	327 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	YPL066W	Q12194	479 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	VPS5	Q92331	675 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	BAS1	P22035	811 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	APM2	P38700	605 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	YNL193W	P53870	558 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	NMA111	P53920	997 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	YPR015C	Q12531	247 aa		4.86	□□□□□ -1.63
SIP1	YDR422C	TRP5	P00931	707 aa	Known RBP	4.85	□□□□□ -1.63
SIP1	YDR422C	TOP3	P13099	656 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	SPC105	P53148	917 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	UBX4	P54730	416 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	ISU2	Q12056	156 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	MCD1	Q12158	566 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	REC8	Q12188	680 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	TPD3	P31383	635 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	RPS0B	P46654	252 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9 ms