RNA–Protein interactions for RNA: YDR201W

SPC19, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC19, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC19	YDR201W	PRP40	P33203	583 aa	Known RBP	4.87	□□□□□ -1.63
SPC19	YDR201W	RFC1	P38630	861 aa	Known RBP	4.87	□□□□□ -1.63
SPC19	YDR201W	HGH1	P48362	394 aa	Known RBP	4.87	□□□□□ -1.63
SPC19	YDR201W	YGR035C	P53222	116 aa		4.87	□□□□□ -1.63
SPC19	YDR201W	MDG1	P53885	366 aa		4.87	□□□□□ -1.63
SPC19	YDR201W	APL2	P36000	726 aa	Predicted RBP	4.86	□□□□□ -1.63
SPC19	YDR201W	YIR014W	P40570	242 aa		4.86	□□□□□ -1.63
SPC19	YDR201W	YJR008W	P47085	338 aa		4.86	□□□□□ -1.63
SPC19	YDR201W	PDC1	P06169	563 aa	Known RBP	4.85	□□□□□ -1.63
SPC19	YDR201W	LPD1	P09624	499 aa	Known RBP	4.85	□□□□□ -1.63
SPC19	YDR201W	GLY1	P37303	387 aa	Known RBP	4.85	□□□□□ -1.63
SPC19	YDR201W	OPY1	P38271	328 aa		4.85	□□□□□ -1.63
SPC19	YDR201W	YJL181W	P46987	611 aa		4.85	□□□□□ -1.63
SPC19	YDR201W	PKH1	Q03407	766 aa		4.85	□□□□□ -1.63
SPC19	YDR201W	PHM7	Q12252	991 aa		4.85	□□□□□ -1.63
SPC19	YDR201W	ARG8	P18544	423 aa		4.84	□□□□□ -1.63
SPC19	YDR201W	UBP12	P39538	1254 aa		4.84	□□□□□ -1.63
SPC19	YDR201W	RPN11	P43588	306 aa	Known RBP	4.84	□□□□□ -1.63
SPC19	YDR201W	NUP85	P46673	744 aa		4.84	□□□□□ -1.63
SPC19	YDR201W	TEA1	P47988	759 aa		4.84	□□□□□ -1.63
SPC19	YDR201W	YPR204W	Q08995	1032 aa		4.84	□□□□□ -1.63
SPC19	YDR201W	NCB2	Q92317	146 aa		4.84	□□□□□ -1.63
SPC19	YDR201W	CDC16	P09798	840 aa		4.83	□□□□□ -1.64
SPC19	YDR201W	IME2	P32581	645 aa		4.83	□□□□□ -1.64
SPC19	YDR201W	SSF1	P38789	453 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC19	YDR201W	YGL082W	P53155	381 aa		4.83	□□□□□ -1.64
SPC19	YDR201W	TYW1	Q08960	810 aa	Known RBP	4.83	□□□□□ -1.64
SPC19	YDR201W	PSH1	Q12161	406 aa		4.83	□□□□□ -1.64
SPC19	YDR201W	MAM3	Q12296	706 aa		4.83	□□□□□ -1.64
SPC19	YDR201W	PDR18	P53756	1333 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	PCT1	P13259	424 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	KIP2	P28743	706 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	DLD1	P32891	587 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	SER1	P33330	395 aa	Known RBP	4.82	□□□□□ -1.64
SPC19	YDR201W	BRN1	P38170	754 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	ITC1	P53125	1264 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	SCW11	P53189	542 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	EAF7	P53911	425 aa	Known RBP	4.82	□□□□□ -1.64
SPC19	YDR201W	FCP1	Q03254	732 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	YMR074C	Q04773	145 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	HPF1	Q05164	967 aa		4.82	□□□□□ -1.64
SPC19	YDR201W	SUP35	P05453	685 aa	Known RBP	4.81	□□□□□ -1.64
SPC19	YDR201W	MIP1	P15801	1254 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	UBP1	P25037	809 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	SLA1	P32790	1244 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	MRT4	P33201	236 aa	Known RBP	4.81	□□□□□ -1.64
SPC19	YDR201W	ECM21	P38167	1117 aa	Known RBP	4.81	□□□□□ -1.64
SPC19	YDR201W	NPR2	P39923	615 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	YIR007W	P40566	764 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	MLC1	P53141	149 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	ALR1	Q08269	859 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	RLF2	Q12495	606 aa		4.81	□□□□□ -1.64
SPC19	YDR201W	FAS2	P19097	1887 aa	Known RBP	4.81	□□□□□ -1.64
SPC19	YDR201W	NOT3	P06102	836 aa	Known RBP	4.8	□□□□□ -1.64
SPC19	YDR201W	VAS1	P07806	1104 aa	Known RBP	4.8	□□□□□ -1.64
SPC19	YDR201W	IXR1	P33417	597 aa		4.8	□□□□□ -1.64
SPC19	YDR201W	RPA14	P50106	137 aa		4.8	□□□□□ -1.64
SPC19	YDR201W	NIS1	P53939	407 aa		4.8	□□□□□ -1.64
SPC19	YDR201W	RMD1	Q03441	430 aa		4.8	□□□□□ -1.64
SPC19	YDR201W	NYV1	Q12255	253 aa		4.8	□□□□□ -1.64
SPC19	YDR201W	TY1A-BL	Q12266	440 aa		4.8	□□□□□ -1.64
SPC19	YDR201W	PMD1	P32634	1753 aa		4.8	□□□□□ -1.64
SPC19	YDR201W	SSK22	P25390	1331 aa	Predicted RBP	4.79	□□□□□ -1.64
SPC19	YDR201W	HXT13	P39924	564 aa		4.79	□□□□□ -1.64
SPC19	YDR201W	YGL242C	P53066	181 aa		4.79	□□□□□ -1.64
SPC19	YDR201W	HXT17	P53631	564 aa		4.79	□□□□□ -1.64
SPC19	YDR201W	BRE1	Q07457	700 aa	Known RBP	4.79	□□□□□ -1.64
SPC19	YDR201W	BUG1	Q12191	341 aa		4.79	□□□□□ -1.64
SPC19	YDR201W	SNU66	Q12420	587 aa	Predicted RBP	4.79	□□□□□ -1.64
SPC19	YDR201W	SAC3	P46674	1301 aa		4.78	□□□□□ -1.64
SPC19	YDR201W	SRS2	P12954	1174 aa		4.78	□□□□□ -1.64
SPC19	YDR201W	SLY41	P22215	453 aa		4.78	□□□□□ -1.64
SPC19	YDR201W	KTR3	P38130	404 aa	Predicted RBP	4.78	□□□□□ -1.64
SPC19	YDR201W	FPR4	Q06205	392 aa	Predicted RBP	4.78	□□□□□ -1.64
SPC19	YDR201W	YPR097W	Q06839	1073 aa		4.78	□□□□□ -1.64
SPC19	YDR201W	RNR2	P09938	399 aa	Known RBP	4.77	□□□□□ -1.65
SPC19	YDR201W	GLN1	P32288	370 aa	Known RBP	4.77	□□□□□ -1.65
SPC19	YDR201W	VPS24	P36095	224 aa	Known RBP	4.77	□□□□□ -1.65
SPC19	YDR201W	DJP1	P40564	432 aa		4.77	□□□□□ -1.65
SPC19	YDR201W	MRPS35	P53292	345 aa		4.77	□□□□□ -1.65
SPC19	YDR201W	PUS6	P53294	404 aa		4.77	□□□□□ -1.65
SPC19	YDR201W	ALO1	P54783	526 aa	Known RBP	4.77	□□□□□ -1.65
SPC19	YDR201W	RAT1	Q02792	1006 aa	Known RBP	4.77	□□□□□ -1.65
SPC19	YDR201W	RIM20	Q12033	661 aa		4.77	□□□□□ -1.65
SPC19	YDR201W	HAT1	Q12341	374 aa		4.77	□□□□□ -1.65
SPC19	YDR201W	HKR1	P41809	1802 aa		4.76	□□□□□ -1.65
SPC19	YDR201W	SEC18	P18759	758 aa	Known RBP	4.76	□□□□□ -1.65
SPC19	YDR201W	AAP1	P37898	856 aa	Known RBP	4.76	□□□□□ -1.65
SPC19	YDR201W	STM1	P39015	273 aa	Known RBP	4.76	□□□□□ -1.65
SPC19	YDR201W	ICP55	P40051	511 aa		4.76	□□□□□ -1.65
SPC19	YDR201W	KRI1	P42846	591 aa	Known RBP	4.76	□□□□□ -1.65
SPC19	YDR201W	LYS4	P49367	693 aa	Predicted RBP	4.76	□□□□□ -1.65
SPC19	YDR201W	UTP22	P53254	1237 aa	Predicted RBP	4.76	□□□□□ -1.65
SPC19	YDR201W	TBF1	Q02457	562 aa		4.76	□□□□□ -1.65
SPC19	YDR201W	UBP16	Q02863	499 aa		4.76	□□□□□ -1.65
SPC19	YDR201W	LSP1	Q12230	341 aa	Known RBP	4.76	□□□□□ -1.65
SPC19	YDR201W	YDL206W	Q12424	762 aa		4.76	□□□□□ -1.65
SPC19	YDR201W	KTR1	P27810	393 aa	Known RBP	4.75	□□□□□ -1.65
SPC19	YDR201W	DSF2	P38213	736 aa		4.75	□□□□□ -1.65
SPC19	YDR201W	PBY1	P38254	753 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms