RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C PET123P17558 318 aa6.22□□□□□ -1.41
RFA1YAR007C BOI2P39969 1040 aa6.22□□□□□ -1.41
RFA1YAR007C WAR1Q03631 944 aa6.22□□□□□ -1.41
RFA1YAR007C RRB1Q04225 511 aaKnown RBP6.22□□□□□ -1.41
RFA1YAR007C YIL177CP40434 1758 aa6.22□□□□□ -1.41
RFA1YAR007C YJL225CP40889 1758 aa6.22□□□□□ -1.41
RFA1YAR007C ADE6P38972 1358 aaKnown RBP6.22□□□□□ -1.41
RFA1YAR007C HSP104P31539 908 aaKnown RBP6.22□□□□□ -1.41
RFA1YAR007C SRP40P32583 406 aaPredicted RBP6.22□□□□□ -1.41
RFA1YAR007C PCH2P38126 564 aa6.22□□□□□ -1.41
RFA1YAR007C RRM3P38766 723 aa6.22□□□□□ -1.41
RFA1YAR007C RAD54P32863 898 aa6.21□□□□□ -1.42
RFA1YAR007C DEF1P35732 738 aaKnown RBP6.21□□□□□ -1.42
RFA1YAR007C ECM21P38167 1117 aaKnown RBP6.21□□□□□ -1.42
RFA1YAR007C YDR090CQ03193 310 aa6.21□□□□□ -1.42
RFA1YAR007C APL4Q12028 832 aa6.21□□□□□ -1.42
RFA1YAR007C MRP7P12687 371 aa6.2□□□□□ -1.42
RFA1YAR007C RAM1P22007 431 aa6.2□□□□□ -1.42
RFA1YAR007C SWH1P35845 1188 aa6.2□□□□□ -1.42
RFA1YAR007C BYE1P36106 594 aa6.2□□□□□ -1.42
RFA1YAR007C PDR18P53756 1333 aa6.2□□□□□ -1.42
RFA1YAR007C STE11P23561 717 aa6.19□□□□□ -1.42
RFA1YAR007C GSY2P27472 705 aa6.19□□□□□ -1.42
RFA1YAR007C SLD2P34252 453 aa6.19□□□□□ -1.42
RFA1YAR007C MAL33P38157 468 aa6.19□□□□□ -1.42
RFA1YAR007C RGD1P38339 666 aa6.19□□□□□ -1.42
RFA1YAR007C NOC2P39744 710 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C MRPS35P53292 345 aa6.19□□□□□ -1.42
RFA1YAR007C YPL225WQ08971 146 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C ELG1Q12050 791 aa6.19□□□□□ -1.42
RFA1YAR007C YPL150WQ12152 901 aa6.19□□□□□ -1.42
RFA1YAR007C MCM16Q12262 181 aa6.19□□□□□ -1.42
RFA1YAR007C URB1P34241 1764 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C TPM1P17536 199 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C SRP54P20424 541 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C CDC15P27636 974 aa6.19□□□□□ -1.42
RFA1YAR007C SAP1P39955 897 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C VID28P40547 921 aa6.19□□□□□ -1.42
RFA1YAR007C CTK3P46963 296 aaPredicted RBP6.19□□□□□ -1.42
RFA1YAR007C STR2P47164 639 aa6.19□□□□□ -1.42
RFA1YAR007C HGH1P48362 394 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C YPT11P48559 417 aa6.19□□□□□ -1.42
RFA1YAR007C YGL242CP53066 181 aa6.19□□□□□ -1.42
RFA1YAR007C PRP43P53131 767 aaKnown RBP6.19□□□□□ -1.42
RFA1YAR007C RBA50Q04418 439 aa6.19□□□□□ -1.42
RFA1YAR007C DOS2P54858 310 aa6.18□□□□□ -1.42
RFA1YAR007C BRE1Q07457 700 aaKnown RBP6.18□□□□□ -1.42
RFA1YAR007C PDR1P12383 1068 aa6.17□□□□□ -1.42
RFA1YAR007C UBC1P21734 215 aaKnown RBP6.17□□□□□ -1.42
RFA1YAR007C PSY4P38193 441 aa6.17□□□□□ -1.42
RFA1YAR007C SPO22P40511 975 aa6.17□□□□□ -1.42
RFA1YAR007C APT1P49435 187 aaKnown RBP6.17□□□□□ -1.42
RFA1YAR007C AOS1Q06624 347 aa6.17□□□□□ -1.42
RFA1YAR007C YCG1Q06680 1035 aa6.17□□□□□ -1.42
RFA1YAR007C YOL057WQ08225 711 aa6.17□□□□□ -1.42
RFA1YAR007C RAD4P14736 754 aa6.17□□□□□ -1.42
RFA1YAR007C RRP43P25359 394 aaPredicted RBP6.17□□□□□ -1.42
RFA1YAR007C SAP190P36123 1033 aa6.17□□□□□ -1.42
RFA1YAR007C REI1P38344 393 aaPredicted RBP6.17□□□□□ -1.42
RFA1YAR007C TFG2P41896 400 aaPredicted RBP6.17□□□□□ -1.42
RFA1YAR007C VPS72Q03388 795 aa6.17□□□□□ -1.42
RFA1YAR007C PGA3Q12746 312 aaKnown RBP6.17□□□□□ -1.42
RFA1YAR007C SWI1P09547 1314 aa6.16□□□□□ -1.42
RFA1YAR007C VPS75P53853 264 aa6.16□□□□□ -1.42
RFA1YAR007C YDR306CQ06640 478 aa6.16□□□□□ -1.42
RFA1YAR007C PSK2Q08217 1101 aa6.16□□□□□ -1.42
RFA1YAR007C PUS1Q12211 544 aaKnown RBP6.16□□□□□ -1.42
RFA1YAR007C NCB2Q92317 146 aa6.16□□□□□ -1.42
RFA1YAR007C SPT2P06843 333 aaPredicted RBP6.15□□□□□ -1.42
RFA1YAR007C SWI3P32591 825 aa6.15□□□□□ -1.42
RFA1YAR007C RFC5P38251 354 aa6.15□□□□□ -1.42
RFA1YAR007C CCT4P39078 528 aaKnown RBP6.15□□□□□ -1.42
RFA1YAR007C VPS4P52917 437 aa6.15□□□□□ -1.42
RFA1YAR007C CAF130P53280 1122 aaPredicted RBP6.15□□□□□ -1.42
RFA1YAR007C OMS1Q06668 471 aa6.15□□□□□ -1.42
RFA1YAR007C TY4B-HP0C2J7 1802 aa6.15□□□□□ -1.42
RFA1YAR007C TY4B-JP47024 1803 aa6.15□□□□□ -1.42
RFA1YAR007C DPB3P27344 201 aa6.15□□□□□ -1.43
RFA1YAR007C RRP1P35178 278 aaPredicted RBP6.15□□□□□ -1.43
RFA1YAR007C ALO1P54783 526 aaKnown RBP6.15□□□□□ -1.43
RFA1YAR007C NSE3Q05541 303 aa6.15□□□□□ -1.43
RFA1YAR007C RPO26P20435 155 aa6.14□□□□□ -1.43
RFA1YAR007C KTR3P38130 404 aaPredicted RBP6.14□□□□□ -1.43
RFA1YAR007C YHL017WP38745 532 aa6.14□□□□□ -1.43
RFA1YAR007C CIC1P38779 376 aaKnown RBP6.14□□□□□ -1.43
RFA1YAR007C CAJ1P39101 391 aa6.14□□□□□ -1.43
RFA1YAR007C SEC9P40357 651 aa6.14□□□□□ -1.43
RFA1YAR007C MLC1P53141 149 aa6.14□□□□□ -1.43
RFA1YAR007C PIB2P53191 635 aa6.14□□□□□ -1.43
RFA1YAR007C ZDS2P54786 942 aa6.14□□□□□ -1.43
RFA1YAR007C SFH1Q06168 426 aa6.14□□□□□ -1.43
RFA1YAR007C TMA16Q08687 178 aa6.14□□□□□ -1.43
RFA1YAR007C SEC39Q12745 709 aa6.14□□□□□ -1.43
RFA1YAR007C PDC1P06169 563 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C UGA3P26370 528 aa6.13□□□□□ -1.43
RFA1YAR007C KTR1P27810 393 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C ECM32P32644 1121 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C STO1P34160 861 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C NUP133P36161 1157 aa6.13□□□□□ -1.43
RFA1YAR007C NDC80P40460 691 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms