RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 WIPF1O43516 503 aa13.17□□□□□ -0.3
CBWD1-228ENST00000619157 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
CBWD1-228ENST00000619157 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
CBWD1-228ENST00000619157 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
CBWD1-228ENST00000619157 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
CBWD1-228ENST00000619157 STK17AQ9UEE5 414 aa13.15□□□□□ -0.3
CBWD1-228ENST00000619157 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
CBWD1-228ENST00000619157 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
CBWD1-228ENST00000619157 BMP1P13497 986 aa13.13□□□□□ -0.31
CBWD1-228ENST00000619157 INSM1Q01101 510 aaPredicted RBP13.13□□□□□ -0.31
CBWD1-228ENST00000619157 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
CBWD1-228ENST00000619157 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
CBWD1-228ENST00000619157 FAM217BQ9NTX9 383 aaPredicted RBP13.13□□□□□ -0.31
CBWD1-228ENST00000619157 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
CBWD1-228ENST00000619157 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
CBWD1-228ENST00000619157 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
CBWD1-228ENST00000619157 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
CBWD1-228ENST00000619157 EHBP1Q8NDI1 1231 aa13.11□□□□□ -0.31
CBWD1-228ENST00000619157 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
CBWD1-228ENST00000619157 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
CBWD1-228ENST00000619157 CLCN1P35523 988 aa13.1□□□□□ -0.31
CBWD1-228ENST00000619157 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
CBWD1-228ENST00000619157 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
CBWD1-228ENST00000619157 ABCA5Q8WWZ7 1642 aa13.08□□□□□ -0.32
CBWD1-228ENST00000619157 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
CBWD1-228ENST00000619157 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
CBWD1-228ENST00000619157 SIAH2O43255 324 aa13.07□□□□□ -0.32
CBWD1-228ENST00000619157 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
CBWD1-228ENST00000619157 WASF2Q9Y6W5 498 aa13.07□□□□□ -0.32
CBWD1-228ENST00000619157 FDX1P10109 184 aa13.06□□□□□ -0.32
CBWD1-228ENST00000619157 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
CBWD1-228ENST00000619157 CHD1O14646 1710 aa13.05□□□□□ -0.32
CBWD1-228ENST00000619157 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
CBWD1-228ENST00000619157 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
CBWD1-228ENST00000619157 CAPN5O15484 640 aaPredicted RBP13.04□□□□□ -0.32
CBWD1-228ENST00000619157 MS4A1P11836 297 aa13.04□□□□□ -0.32
CBWD1-228ENST00000619157 SH3BP2P78314 561 aa13.04□□□□□ -0.32
CBWD1-228ENST00000619157 LINC01559Q495D7 138 aa13.04□□□□□ -0.32
CBWD1-228ENST00000619157 CCNYL3P0C7X3 344 aa13.03□□□□□ -0.32
CBWD1-228ENST00000619157 VEGFBP49765 207 aa13.02□□□□□ -0.33
CBWD1-228ENST00000619157 TLL2Q9Y6L7 1015 aa13.02□□□□□ -0.33
CBWD1-228ENST00000619157 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
CBWD1-228ENST00000619157 PBRM1Q86U86 1689 aa13.02□□□□□ -0.33
CBWD1-228ENST00000619157 NDUFV2P19404 249 aa13□□□□□ -0.33
CBWD1-228ENST00000619157 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
CBWD1-228ENST00000619157 SLC16A10Q8TF71 515 aa12.99□□□□□ -0.33
CBWD1-228ENST00000619157 UNC93B1Q9H1C4 597 aa12.99□□□□□ -0.33
CBWD1-228ENST00000619157 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
CBWD1-228ENST00000619157 GMPRP36959 345 aa12.98□□□□□ -0.33
CBWD1-228ENST00000619157 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
CBWD1-228ENST00000619157 BAP1Q92560 729 aa12.97□□□□□ -0.33
CBWD1-228ENST00000619157 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
CBWD1-228ENST00000619157 SSTR3P32745 418 aaPredicted RBP12.96□□□□□ -0.33
CBWD1-228ENST00000619157 PTPRNQ16849 979 aa12.96□□□□□ -0.33
CBWD1-228ENST00000619157 CLASP1Q7Z460 1538 aa12.96□□□□□ -0.33
CBWD1-228ENST00000619157 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
CBWD1-228ENST00000619157 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
CBWD1-228ENST00000619157 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
CBWD1-228ENST00000619157 ARHGEF11O15085 1522 aa12.95□□□□□ -0.34
CBWD1-228ENST00000619157 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
CBWD1-228ENST00000619157 PRR7Q8TB68 274 aa12.94□□□□□ -0.34
CBWD1-228ENST00000619157 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
CBWD1-228ENST00000619157 ZFP42Q96MM3 310 aa12.93□□□□□ -0.34
CBWD1-228ENST00000619157 EVA1BQ9NVM1 165 aa12.93□□□□□ -0.34
CBWD1-228ENST00000619157 KCNH2Q12809 1159 aa12.92□□□□□ -0.34
CBWD1-228ENST00000619157 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
CBWD1-228ENST00000619157 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
CBWD1-228ENST00000619157 ZNF511Q8NB15 262 aa12.91□□□□□ -0.34
CBWD1-228ENST00000619157 IRF7Q92985 503 aa12.91□□□□□ -0.34
CBWD1-228ENST00000619157 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
CBWD1-228ENST00000619157 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
CBWD1-228ENST00000619157 NNTQ13423 1086 aa12.9□□□□□ -0.34
CBWD1-228ENST00000619157 FHAD1B1AJZ9 1412 aa12.89□□□□□ -0.35
CBWD1-228ENST00000619157 H3BM21 787 aa12.88□□□□□ -0.35
CBWD1-228ENST00000619157 MTMR2Q13614 643 aa12.88□□□□□ -0.35
CBWD1-228ENST00000619157 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
CBWD1-228ENST00000619157 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
CBWD1-228ENST00000619157 SOBPA7XYQ1 873 aa12.87□□□□□ -0.35
CBWD1-228ENST00000619157 LORP23490 312 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-228ENST00000619157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
CBWD1-228ENST00000619157 ZSCAN1Q8NBB4 408 aa12.87□□□□□ -0.35
CBWD1-228ENST00000619157 NUP160Q12769 1436 aa12.87□□□□□ -0.35
CBWD1-228ENST00000619157 IGF1RP08069 1367 aa12.86□□□□□ -0.35
CBWD1-228ENST00000619157 PURBQ96QR8 312 aaKnown RBP12.86□□□□□ -0.35
CBWD1-228ENST00000619157 VARSP26640 1264 aaKnown RBP12.85□□□□□ -0.35
CBWD1-228ENST00000619157 CTHP32929 405 aa12.85□□□□□ -0.35
CBWD1-228ENST00000619157 MRPL14Q6P1L8 145 aaKnown RBP12.85□□□□□ -0.35
CBWD1-228ENST00000619157 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
CBWD1-228ENST00000619157 NPAS3Q8IXF0 933 aa12.85□□□□□ -0.35
CBWD1-228ENST00000619157 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
CBWD1-228ENST00000619157 FAM181BA6NEQ2 426 aa12.84□□□□□ -0.35
CBWD1-228ENST00000619157 TIMP2P16035 220 aa12.84□□□□□ -0.35
CBWD1-228ENST00000619157 WDR4P57081 412 aaKnown RBP12.84□□□□□ -0.35
CBWD1-228ENST00000619157 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
CBWD1-228ENST00000619157 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
CBWD1-228ENST00000619157 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
CBWD1-228ENST00000619157 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
CBWD1-228ENST00000619157 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
CBWD1-228ENST00000619157 ADH1CP00326 375 aa12.81□□□□□ -0.36
CBWD1-228ENST00000619157 ARID5BQ14865 1188 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms