RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 AEBP2Q6ZN18 517 aaPredicted RBP37.31■■■■□ 3.56
CBWD1-228ENST00000619157 CHIC1Q5VXU3 224 aa35.19■■■■□ 3.22
CBWD1-228ENST00000619157 SENP3Q9H4L4 574 aaPredicted RBP31.75■■■□□ 2.67
CBWD1-228ENST00000619157 PHF23Q9BUL5 403 aaPredicted RBP31.36■■■□□ 2.61
CBWD1-228ENST00000619157 FOXD1Q16676 465 aa29.68■■■□□ 2.34
CBWD1-228ENST00000619157 PLPPR3Q6T4P5 718 aa28.03■■■□□ 2.08
CBWD1-228ENST00000619157 MSH5O43196 834 aa27.76■■■□□ 2.03
CBWD1-228ENST00000619157 PIAS4Q8N2W9 510 aaPredicted RBP27.72■■■□□ 2.03
CBWD1-228ENST00000619157 PPP6R1Q9UPN7 881 aa27.66■■■□□ 2.02
CBWD1-228ENST00000619157 ADRA2BP18089 450 aa27.59■■■□□ 2.01
CBWD1-228ENST00000619157 POTEDQ86YR6 584 aa27.45■■□□□ 1.98
CBWD1-228ENST00000619157 MAPK8IP2Q13387 824 aaPredicted RBP25.4■■□□□ 1.66
CBWD1-228ENST00000619157 DMRT2Q9Y5R5 561 aa25.16■■□□□ 1.62
CBWD1-228ENST00000619157 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
CBWD1-228ENST00000619157 PPP4R3CPQ6ZMV5 832 aa24.59■■□□□ 1.53
CBWD1-228ENST00000619157 DCAF8L1A6NGE4 600 aa24.29■■□□□ 1.48
CBWD1-228ENST00000619157 HOXD11P31277 338 aaPredicted RBP24.15■■□□□ 1.46
CBWD1-228ENST00000619157 CNKSR2Q8WXI2 1034 aa24.12■■□□□ 1.45
CBWD1-228ENST00000619157 CACNB1Q02641 598 aaPredicted RBP24■■□□□ 1.43
CBWD1-228ENST00000619157 RNF216Q9NWF9 866 aaPredicted RBP23.93■■□□□ 1.42
CBWD1-228ENST00000619157 RNF39Q9H2S5 420 aa23.7■■□□□ 1.38
CBWD1-228ENST00000619157 NCBP3Q53F19 620 aaKnown RBP23.54■■□□□ 1.36
CBWD1-228ENST00000619157 C1QBPQ07021 282 aaKnown RBP23.29■■□□□ 1.32
CBWD1-228ENST00000619157 NPM3O75607 178 aaKnown RBP23.27■■□□□ 1.32
CBWD1-228ENST00000619157 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
CBWD1-228ENST00000619157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
CBWD1-228ENST00000619157 KCNA4P22459 653 aa22.73■■□□□ 1.23
CBWD1-228ENST00000619157 U3KPZ7 1027 aaPredicted RBP22.59■■□□□ 1.21
CBWD1-228ENST00000619157 SPINK5Q9NQ38 1064 aaPredicted RBP22.36■■□□□ 1.17
CBWD1-228ENST00000619157 CAPN15O75808 1086 aa22.32■■□□□ 1.16
CBWD1-228ENST00000619157 SLC4A2P04920 1241 aa22.27■■□□□ 1.16
CBWD1-228ENST00000619157 DSG3P32926 999 aa22.17■■□□□ 1.14
CBWD1-228ENST00000619157 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
CBWD1-228ENST00000619157 ABCB7O75027 752 aa21.84■■□□□ 1.09
CBWD1-228ENST00000619157 APLP2Q06481 763 aa21.81■■□□□ 1.08
CBWD1-228ENST00000619157 ZNF219Q9P2Y4 722 aaPredicted RBP21.78■■□□□ 1.08
CBWD1-228ENST00000619157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
CBWD1-228ENST00000619157 HNRNPUL2Q1KMD3 747 aaKnown RBP21.77■■□□□ 1.08
CBWD1-228ENST00000619157 SAMD1Q6SPF0 538 aaPredicted RBP21.68■■□□□ 1.06
CBWD1-228ENST00000619157 MYCNP04198 464 aaPredicted RBP21.49■■□□□ 1.03
CBWD1-228ENST00000619157 POTEHQ6S545 545 aa21.47■■□□□ 1.03
CBWD1-228ENST00000619157 SLC4A1APQ9BWU0 796 aaKnown RBP21.4■■□□□ 1.02
CBWD1-228ENST00000619157 POLA2Q14181 598 aa21.26■□□□□ 0.99
CBWD1-228ENST00000619157 FOXD4L1Q9NU39 408 aa21.2■□□□□ 0.98
CBWD1-228ENST00000619157 ATF5Q9Y2D1 282 aaPredicted RBP21.11■□□□□ 0.97
CBWD1-228ENST00000619157 RBM42Q9BTD8 480 aaKnown RBP21.09■□□□□ 0.97
CBWD1-228ENST00000619157 ZBTB22O15209 634 aa20.91■□□□□ 0.94
CBWD1-228ENST00000619157 CHRDL2Q6WN34 429 aa20.76■□□□□ 0.91
CBWD1-228ENST00000619157 ZBTB12Q9Y330 459 aaPredicted RBP20.71■□□□□ 0.91
CBWD1-228ENST00000619157 OSCARQ8IYS5 282 aa20.65■□□□□ 0.9
CBWD1-228ENST00000619157 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
CBWD1-228ENST00000619157 ATXN8OSP0DMR3 200 aa20.46■□□□□ 0.87
CBWD1-228ENST00000619157 REM2Q8IYK8 340 aaPredicted RBP20.45■□□□□ 0.86
CBWD1-228ENST00000619157 PITPNM1O00562 1244 aa20.27■□□□□ 0.84
CBWD1-228ENST00000619157 PIP4P2Q8N4L2 257 aa20.25■□□□□ 0.83
CBWD1-228ENST00000619157 FBLN2P98095 1184 aa20.2■□□□□ 0.82
CBWD1-228ENST00000619157 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
CBWD1-228ENST00000619157 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
CBWD1-228ENST00000619157 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
CBWD1-228ENST00000619157 SPDYE2Q495Y8 402 aa20.09■□□□□ 0.81
CBWD1-228ENST00000619157 FXR2P51116 673 aaKnown RBP eCLIP20.05■□□□□ 0.8
CBWD1-228ENST00000619157 SP7Q8TDD2 431 aaPredicted RBP20.04■□□□□ 0.8
CBWD1-228ENST00000619157 HAX1O00165 279 aa19.95■□□□□ 0.78
CBWD1-228ENST00000619157 ZNF692Q9BU19 519 aaPredicted RBP19.89■□□□□ 0.77
CBWD1-228ENST00000619157 CLEC11AQ9Y240 323 aa19.88■□□□□ 0.77
CBWD1-228ENST00000619157 SSUH2Q9Y2M2 353 aa19.82■□□□□ 0.76
CBWD1-228ENST00000619157 SPDYE1Q8NFV5 336 aaPredicted RBP19.8■□□□□ 0.76
CBWD1-228ENST00000619157 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
CBWD1-228ENST00000619157 PRKAR2AP13861 404 aaKnown RBP19.73■□□□□ 0.75
CBWD1-228ENST00000619157 EVX2Q03828 476 aa19.72■□□□□ 0.75
CBWD1-228ENST00000619157 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
CBWD1-228ENST00000619157 CHADLQ6NUI6 762 aa19.54■□□□□ 0.72
CBWD1-228ENST00000619157 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
CBWD1-228ENST00000619157 PRR29P0C7W0 189 aa19.46■□□□□ 0.71
CBWD1-228ENST00000619157 C19orf67A6NJJ6 358 aa19.43■□□□□ 0.7
CBWD1-228ENST00000619157 GABBR2O75899 941 aa19.21■□□□□ 0.67
CBWD1-228ENST00000619157 FARP1Q9Y4F1 1045 aaPredicted RBP19.15■□□□□ 0.66
CBWD1-228ENST00000619157 CD44P16070 742 aaKnown RBP19.11■□□□□ 0.65
CBWD1-228ENST00000619157 SPDYE4A6NLX3 237 aa19.05■□□□□ 0.64
CBWD1-228ENST00000619157 CREBZFQ9NS37 354 aa18.95■□□□□ 0.62
CBWD1-228ENST00000619157 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
CBWD1-228ENST00000619157 POTEIP0CG38 1075 aa18.83■□□□□ 0.6
CBWD1-228ENST00000619157 ZRANB1Q9UGI0 708 aa18.82■□□□□ 0.6
CBWD1-228ENST00000619157 LHX8Q68G74 356 aa18.81■□□□□ 0.6
CBWD1-228ENST00000619157 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
CBWD1-228ENST00000619157 CLCN6P51797 869 aa18.67■□□□□ 0.58
CBWD1-228ENST00000619157 DCBLD2Q96PD2 775 aa18.66■□□□□ 0.58
CBWD1-228ENST00000619157 GALR2O43603 387 aaPredicted RBP18.61■□□□□ 0.57
CBWD1-228ENST00000619157 PHF12Q96QT6 1004 aa18.59■□□□□ 0.57
CBWD1-228ENST00000619157 MNX1P50219 401 aaPredicted RBP18.58■□□□□ 0.56
CBWD1-228ENST00000619157 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
CBWD1-228ENST00000619157 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
CBWD1-228ENST00000619157 PROM2Q8N271 834 aa18.47■□□□□ 0.55
CBWD1-228ENST00000619157 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
CBWD1-228ENST00000619157 TSPYL2Q9H2G4 693 aaPredicted RBP18.32■□□□□ 0.52
CBWD1-228ENST00000619157 MS4A3Q96HJ5 214 aa18.3■□□□□ 0.52
CBWD1-228ENST00000619157 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
CBWD1-228ENST00000619157 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
CBWD1-228ENST00000619157 MIER1Q8N108 512 aa18.19■□□□□ 0.5
CBWD1-228ENST00000619157 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms