RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 VGLL3A8MV65 326 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 CLGNO14967 610 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 TRAIPQ9BWF2 469 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 TPM2P07951 284 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 CDAN1Q8IWY9 1227 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 SMAP1Q8IYB5 467 aaPredicted RBP6.05□□□□□ -1.44
LINC01109-201ENST00000603837 MICAL1Q8TDZ2 1067 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 ZC3H15Q8WU90 426 aaKnown RBP6.05□□□□□ -1.44
LINC01109-201ENST00000603837 SH3BP1Q9Y3L3 701 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 MYH16Q9H6N6 1097 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 SUGT1Q9Y2Z0 365 aa6.05□□□□□ -1.44
LINC01109-201ENST00000603837 ERICH3Q5RHP9 1530 aa6.04□□□□□ -1.44
LINC01109-201ENST00000603837 DDRGK1Q96HY6 314 aa6.04□□□□□ -1.44
LINC01109-201ENST00000603837 TMEM51Q9NW97 253 aa6.04□□□□□ -1.44
LINC01109-201ENST00000603837 TERF2IPQ9NYB0 399 aa6.04□□□□□ -1.44
LINC01109-201ENST00000603837 CHD1O14646 1710 aa6.04□□□□□ -1.44
LINC01109-201ENST00000603837 MAP4K4O95819 1239 aaPredicted RBP6.04□□□□□ -1.44
LINC01109-201ENST00000603837 HIC1Q14526 733 aa6.04□□□□□ -1.44
LINC01109-201ENST00000603837 DMRTA1Q5VZB9 504 aa6.04□□□□□ -1.44
LINC01109-201ENST00000603837 ZNF622Q969S3 477 aaKnown RBP eCLIP6.04□□□□□ -1.44
LINC01109-201ENST00000603837 SHROOM2Q13796 1616 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 GPR37O15354 613 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 RAB11FIP3O75154 756 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 TOPBP1Q92547 1522 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 ANKRD62A6NC57 917 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 CCER2I3L3R5 266 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 LSM11P83369 360 aaKnown RBP eCLIP6.03□□□□□ -1.44
LINC01109-201ENST00000603837 NME8Q8N427 588 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 PNMA2Q9UL42 364 aa6.03□□□□□ -1.44
LINC01109-201ENST00000603837 GNPATO15228 680 aa6.02□□□□□ -1.44
LINC01109-201ENST00000603837 PRSS12P56730 875 aa6.02□□□□□ -1.44
LINC01109-201ENST00000603837 RINLQ6ZS11 566 aa6.02□□□□□ -1.44
LINC01109-201ENST00000603837 CDCA7LQ96GN5 454 aa6.02□□□□□ -1.44
LINC01109-201ENST00000603837 ZBED2Q9BTP6 218 aa6.02□□□□□ -1.44
LINC01109-201ENST00000603837 PROX2Q3B8N5 592 aa6.02□□□□□ -1.45
LINC01109-201ENST00000603837 SEMA3FQ13275 785 aa6.02□□□□□ -1.45
LINC01109-201ENST00000603837 ANKRD13DQ6ZTN6 518 aa6.02□□□□□ -1.45
LINC01109-201ENST00000603837 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
LINC01109-201ENST00000603837 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
LINC01109-201ENST00000603837 ARHGEF11O15085 1522 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 PAX3P23760 479 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 PDE6BP35913 854 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 RPS6KL1Q9Y6S9 549 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 KIF4AO95239 1232 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 L1TD1Q5T7N2 865 aaKnown RBP6.01□□□□□ -1.45
LINC01109-201ENST00000603837 PADI6Q6TGC4 694 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 ANP32BQ92688 251 aaKnown RBP6.01□□□□□ -1.45
LINC01109-201ENST00000603837 SPATA32Q96LK8 384 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 FAM117AQ9C073 453 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 PBRM1Q86U86 1689 aa6.01□□□□□ -1.45
LINC01109-201ENST00000603837 ZMYND10O75800 440 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 FECHP22830 423 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 KLHL42Q9P2K6 505 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 VPS8Q8N3P4 1428 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 TRIM6-TRIM34B2RNG4 842 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 CCDC184Q52MB2 194 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 GORABQ5T7V8 394 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 UTP14CQ5TAP6 766 aaKnown RBP6□□□□□ -1.45
LINC01109-201ENST00000603837 MAP7D2Q96T17 732 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 SLC4A5Q9BY07 1137 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 TSKSQ9UJT2 592 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 ABCA5Q8WWZ7 1642 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 GIMAP6Q6P9H5 292 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 VPS9D1Q9Y2B5 631 aa6□□□□□ -1.45
LINC01109-201ENST00000603837 TK2O00142 265 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 TNNT2P45379 298 aaPredicted RBP5.99□□□□□ -1.45
LINC01109-201ENST00000603837 RALBP1Q15311 655 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 ADGRD1Q6QNK2 874 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 PACS2Q86VP3 889 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 ANKRD13AQ8IZ07 590 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 KRI1Q8N9T8 703 aaKnown RBP5.99□□□□□ -1.45
LINC01109-201ENST00000603837 PRXQ9BXM0 1461 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 IRF6O14896 467 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 IRX3P78415 501 aaPredicted RBP5.99□□□□□ -1.45
LINC01109-201ENST00000603837 HNRNPUQ00839 825 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC01109-201ENST00000603837 DNAJC14Q6Y2X3 702 aaPredicted RBP5.99□□□□□ -1.45
LINC01109-201ENST00000603837 CREBRFQ8IUR6 639 aa5.99□□□□□ -1.45
LINC01109-201ENST00000603837 CUX1P39880 1505 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 DDX10Q13206 875 aaKnown RBP5.98□□□□□ -1.45
LINC01109-201ENST00000603837 BARGINQ6ZT62 677 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 KIAA1468Q9P260 1216 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 FAM198AQ9UFP1 575 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 RABGEF1Q9UJ41 708 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 CLIP1P30622 1438 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 ANP32CO43423 234 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 ONECUT3O60422 494 aaPredicted RBP5.98□□□□□ -1.45
LINC01109-201ENST00000603837 DMTNQ08495 405 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 ATL2Q8NHH9 583 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 PCDH10Q9P2E7 1040 aa5.98□□□□□ -1.45
LINC01109-201ENST00000603837 PPFIA4O75335 1185 aa5.97□□□□□ -1.45
LINC01109-201ENST00000603837 TTC13Q8NBP0 860 aa5.97□□□□□ -1.45
LINC01109-201ENST00000603837 TMX4Q9H1E5 349 aaPredicted RBP5.97□□□□□ -1.45
LINC01109-201ENST00000603837 MAP2K5Q13163 448 aa5.97□□□□□ -1.45
LINC01109-201ENST00000603837 GET4Q7L5D6 327 aaPredicted RBP5.97□□□□□ -1.45
LINC01109-201ENST00000603837 SSFA2P28290 1259 aa5.97□□□□□ -1.45
LINC01109-201ENST00000603837 FAM161AQ3B820 660 aa5.97□□□□□ -1.45
LINC01109-201ENST00000603837 MINK1Q8N4C8 1332 aaPredicted RBP5.96□□□□□ -1.45
LINC01109-201ENST00000603837 NBPF26B4DH59 902 aa5.96□□□□□ -1.45
LINC01109-201ENST00000603837 DHX16O60231 1041 aaKnown RBP5.96□□□□□ -1.45
LINC01109-201ENST00000603837 NBPF3Q9H094 633 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms