RNA–Protein interactions for RNA: ENST00000601613.1

SAMD4B-211, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 2,690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-211ENST00000601613 TRMT2AQ8IZ69 625 aaKnown RBP10.62□□□□□ -0.71
SAMD4B-211ENST00000601613 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.62□□□□□ -0.71
SAMD4B-211ENST00000601613 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
SAMD4B-211ENST00000601613 USP19O94966 1318 aa10.61□□□□□ -0.71
SAMD4B-211ENST00000601613 HSP90AA1P07900 732 aaKnown RBP10.61□□□□□ -0.71
SAMD4B-211ENST00000601613 RBM10P98175 930 aaKnown RBP10.61□□□□□ -0.71
SAMD4B-211ENST00000601613 PCDHB15Q9Y5E8 787 aa10.61□□□□□ -0.71
SAMD4B-211ENST00000601613 ADAMTS13Q76LX8 1427 aa10.6□□□□□ -0.71
SAMD4B-211ENST00000601613 ASXL1Q8IXJ9 1541 aa10.6□□□□□ -0.71
SAMD4B-211ENST00000601613 PPLO60437 1756 aa10.6□□□□□ -0.71
SAMD4B-211ENST00000601613 CENPJQ9HC77 1338 aaPredicted RBP10.6□□□□□ -0.71
SAMD4B-211ENST00000601613 E9PSI1 815 aa10.6□□□□□ -0.71
SAMD4B-211ENST00000601613 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
SAMD4B-211ENST00000601613 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
SAMD4B-211ENST00000601613 MORC1Q86VD1 984 aa10.59□□□□□ -0.71
SAMD4B-211ENST00000601613 TCP11L2Q8N4U5 519 aa10.59□□□□□ -0.71
SAMD4B-211ENST00000601613 NKTRP30414 1462 aaKnown RBP10.59□□□□□ -0.71
SAMD4B-211ENST00000601613 KCNA6P17658 529 aa10.58□□□□□ -0.72
SAMD4B-211ENST00000601613 MTHFSP49914 203 aa10.58□□□□□ -0.72
SAMD4B-211ENST00000601613 TSR2Q969E8 191 aaKnown RBP10.58□□□□□ -0.72
SAMD4B-211ENST00000601613 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
SAMD4B-211ENST00000601613 PNNQ9H307 717 aaKnown RBP10.58□□□□□ -0.72
SAMD4B-211ENST00000601613 SETBP1Q9Y6X0 1596 aa10.58□□□□□ -0.72
SAMD4B-211ENST00000601613 LTBP4Q8N2S1 1624 aa10.57□□□□□ -0.72
SAMD4B-211ENST00000601613 IFT172Q9UG01 1749 aa10.57□□□□□ -0.72
SAMD4B-211ENST00000601613 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
SAMD4B-211ENST00000601613 CERKQ8TCT0 537 aa10.57□□□□□ -0.72
SAMD4B-211ENST00000601613 METP08581 1390 aa10.56□□□□□ -0.72
SAMD4B-211ENST00000601613 RARSP54136 660 aaKnown RBP10.56□□□□□ -0.72
SAMD4B-211ENST00000601613 MYOM2P54296 1465 aa10.56□□□□□ -0.72
SAMD4B-211ENST00000601613 PIK3C2GO75747 1445 aa10.56□□□□□ -0.72
SAMD4B-211ENST00000601613 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
SAMD4B-211ENST00000601613 INSRP06213 1382 aa10.55□□□□□ -0.72
SAMD4B-211ENST00000601613 PIK3R4Q99570 1358 aa10.55□□□□□ -0.72
SAMD4B-211ENST00000601613 AMOTL2Q9Y2J4 779 aa10.55□□□□□ -0.72
SAMD4B-211ENST00000601613 ALKQ9UM73 1620 aa10.55□□□□□ -0.72
SAMD4B-211ENST00000601613 PANK2Q9BZ23 570 aa10.55□□□□□ -0.72
SAMD4B-211ENST00000601613 NSD3Q9BZ95 1437 aa10.55□□□□□ -0.72
SAMD4B-211ENST00000601613 NRXN1Q9ULB1 1477 aa10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 U2AF1L5P0DN76 240 aaPredicted RBP10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 U2AF1Q01081 240 aaKnown RBP eCLIP10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 C14orf93Q9H972 538 aaKnown RBP10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 STRCP1A6NGW2 1772 aa10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 EIF3AQ14152 1382 aaKnown RBP10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 FBLN1P23142 703 aa10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 AAMPQ13685 434 aa10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 PROSER2Q86WR7 435 aaPredicted RBP10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 PTPRUQ92729 1446 aa10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 CPS1P31327 1500 aa10.54□□□□□ -0.72
SAMD4B-211ENST00000601613 LAMC1P11047 1609 aa10.53□□□□□ -0.72
SAMD4B-211ENST00000601613 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
SAMD4B-211ENST00000601613 CABP2Q9NPB3 220 aa10.53□□□□□ -0.72
SAMD4B-211ENST00000601613 STK26Q9P289 416 aa10.53□□□□□ -0.72
SAMD4B-211ENST00000601613 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
SAMD4B-211ENST00000601613 GZF1Q9H116 711 aaPredicted RBP10.53□□□□□ -0.72
SAMD4B-211ENST00000601613 CHD2O14647 1828 aaKnown RBP10.53□□□□□ -0.72
SAMD4B-211ENST00000601613 CGNL1Q0VF96 1302 aa10.52□□□□□ -0.73
SAMD4B-211ENST00000601613 U2SURPO15042 1029 aaKnown RBP10.52□□□□□ -0.73
SAMD4B-211ENST00000601613 PDE3AQ14432 1141 aa10.52□□□□□ -0.73
SAMD4B-211ENST00000601613 MYOM1P52179 1685 aa10.52□□□□□ -0.73
SAMD4B-211ENST00000601613 LRRC7Q96NW7 1537 aa10.52□□□□□ -0.73
SAMD4B-211ENST00000601613 XRCC6P12956 609 aaKnown RBP eCLIP10.51□□□□□ -0.73
SAMD4B-211ENST00000601613 NWD1Q149M9 1564 aa10.51□□□□□ -0.73
SAMD4B-211ENST00000601613 RUNDC1Q96C34 613 aa10.51□□□□□ -0.73
SAMD4B-211ENST00000601613 SETD1AO15047 1707 aaKnown RBP10.51□□□□□ -0.73
SAMD4B-211ENST00000601613 TMEM94Q12767 1356 aa10.51□□□□□ -0.73
SAMD4B-211ENST00000601613 CLCN1P35523 988 aa10.51□□□□□ -0.73
SAMD4B-211ENST00000601613 GGNBP2Q9H3C7 697 aa10.51□□□□□ -0.73
SAMD4B-211ENST00000601613 TBC1D2Q9BYX2 928 aa10.5□□□□□ -0.73
SAMD4B-211ENST00000601613 PRDM4Q9UKN5 801 aa10.5□□□□□ -0.73
SAMD4B-211ENST00000601613 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
SAMD4B-211ENST00000601613 FGD1P98174 961 aa10.49□□□□□ -0.73
SAMD4B-211ENST00000601613 EXOSC9Q06265 439 aaKnown RBP10.49□□□□□ -0.73
SAMD4B-211ENST00000601613 NPC1L1Q9UHC9 1359 aa10.48□□□□□ -0.73
SAMD4B-211ENST00000601613 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
SAMD4B-211ENST00000601613 YTHDC2Q9H6S0 1430 aaKnown RBP10.48□□□□□ -0.73
SAMD4B-211ENST00000601613 XRN1Q8IZH2 1706 aaKnown RBP10.48□□□□□ -0.73
SAMD4B-211ENST00000601613 FTSJ3Q8IY81 847 aaKnown RBP10.48□□□□□ -0.73
SAMD4B-211ENST00000601613 ABCC11Q96J66 1382 aa10.47□□□□□ -0.73
SAMD4B-211ENST00000601613 ROBO2Q9HCK4 1378 aa10.47□□□□□ -0.73
SAMD4B-211ENST00000601613 IQSEC2Q5JU85 1478 aa10.47□□□□□ -0.73
SAMD4B-211ENST00000601613 ITPRIPQ8IWB1 547 aa10.47□□□□□ -0.73
SAMD4B-211ENST00000601613 SMC4Q9NTJ3 1288 aa10.47□□□□□ -0.73
SAMD4B-211ENST00000601613 POLR3AO14802 1390 aaPredicted RBP10.47□□□□□ -0.73
SAMD4B-211ENST00000601613 MAPK8IP3Q9UPT6 1336 aa10.47□□□□□ -0.73
SAMD4B-211ENST00000601613 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
SAMD4B-211ENST00000601613 WAPLQ7Z5K2 1190 aa10.46□□□□□ -0.73
SAMD4B-211ENST00000601613 SSH1Q8WYL5 1049 aa10.46□□□□□ -0.73
SAMD4B-211ENST00000601613 ANTXR1Q9H6X2 564 aa10.46□□□□□ -0.73
SAMD4B-211ENST00000601613 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
SAMD4B-211ENST00000601613 TRIM27P14373 513 aa10.46□□□□□ -0.74
SAMD4B-211ENST00000601613 TBC1D32Q96NH3 1257 aa10.46□□□□□ -0.74
SAMD4B-211ENST00000601613 PTCH1Q13635 1447 aa10.46□□□□□ -0.74
SAMD4B-211ENST00000601613 ADGRB1O14514 1584 aa10.46□□□□□ -0.74
SAMD4B-211ENST00000601613 THUMPD2Q9BTF0 503 aaKnown RBP10.45□□□□□ -0.74
SAMD4B-211ENST00000601613 NCOA3Q9Y6Q9 1424 aa10.45□□□□□ -0.74
SAMD4B-211ENST00000601613 XIRP1Q702N8 1843 aaKnown RBP10.45□□□□□ -0.74
SAMD4B-211ENST00000601613 TECPR2O15040 1411 aa10.45□□□□□ -0.74
SAMD4B-211ENST00000601613 MSH6P52701 1360 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms