RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 CCDC148Q8NFR7 591 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 GNAI1P63096 354 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 RNF214Q8ND24 703 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 WDR63Q8IWG1 891 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 ZMYM3Q14202 1370 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 TUBB2AQ13885 445 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 CT47A1Q5JQC4 288 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-216ENST00000569240 RASSF8Q8NHQ8 419 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 TUBB2BQ9BVA1 445 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 SCAND2PQ9GZW5 306 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-216ENST00000569240 TNMDQ9H2S6 317 aa8.42□□□□□ -1.06
CNOT1-216ENST00000569240 TOP2AP11388 1531 aaKnown RBP8.42□□□□□ -1.06
CNOT1-216ENST00000569240 NUP62CLQ9H1M0 184 aa8.41□□□□□ -1.06
CNOT1-216ENST00000569240 EZRP15311 586 aaKnown RBP8.41□□□□□ -1.06
CNOT1-216ENST00000569240 CCDC150Q8NCX0 1101 aa8.41□□□□□ -1.06
CNOT1-216ENST00000569240 SFPQP23246 707 aaKnown RBP eCLIP8.41□□□□□ -1.06
CNOT1-216ENST00000569240 AKAP17AQ02040 695 aaKnown RBP8.41□□□□□ -1.06
CNOT1-216ENST00000569240 TTC31Q49AM3 519 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-216ENST00000569240 GIGYF2Q6Y7W6 1299 aaKnown RBP8.41□□□□□ -1.06
CNOT1-216ENST00000569240 RAPGEF2Q9Y4G8 1499 aa8.41□□□□□ -1.06
CNOT1-216ENST00000569240 DDX19AQ9NUU7 478 aaKnown RBP8.41□□□□□ -1.06
CNOT1-216ENST00000569240 PDZRN3Q9UPQ7 1066 aa8.41□□□□□ -1.06
CNOT1-216ENST00000569240 FBLN2P98095 1184 aa8.41□□□□□ -1.06
CNOT1-216ENST00000569240 PNISRQ8TF01 805 aaKnown RBP8.41□□□□□ -1.06
CNOT1-216ENST00000569240 PPFIBP1Q86W92 1011 aa8.4□□□□□ -1.06
CNOT1-216ENST00000569240 IPO4Q8TEX9 1081 aaKnown RBP8.4□□□□□ -1.06
CNOT1-216ENST00000569240 CPSF2Q9P2I0 782 aaKnown RBP8.4□□□□□ -1.06
CNOT1-216ENST00000569240 VPS37CA5D8V6 355 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-216ENST00000569240 TXLNAP40222 546 aa8.4□□□□□ -1.06
CNOT1-216ENST00000569240 SNX21Q969T3 373 aa8.4□□□□□ -1.06
CNOT1-216ENST00000569240 MNAT1P51948 309 aa8.4□□□□□ -1.06
CNOT1-216ENST00000569240 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
CNOT1-216ENST00000569240 SPATA24Q86W54 205 aa8.4□□□□□ -1.06
CNOT1-216ENST00000569240 CPLX1O14810 134 aa8.4□□□□□ -1.07
CNOT1-216ENST00000569240 PABPN1Q86U42 306 aaKnown RBP eCLIP8.4□□□□□ -1.073e-7■□□□□ 8.9
CNOT1-216ENST00000569240 POTEDQ86YR6 584 aa8.4□□□□□ -1.07
CNOT1-216ENST00000569240 CCDC88BA6NC98 1476 aa8.4□□□□□ -1.07
CNOT1-216ENST00000569240 ARID3CA6NKF2 412 aa8.4□□□□□ -1.07
CNOT1-216ENST00000569240 BRD2P25440 801 aaKnown RBP8.4□□□□□ -1.07
CNOT1-216ENST00000569240 IMMTQ16891 758 aaKnown RBP8.4□□□□□ -1.07
CNOT1-216ENST00000569240 FMNL3Q8IVF7 1028 aa8.4□□□□□ -1.07
CNOT1-216ENST00000569240 MYCBPQ99417 103 aaPredicted RBP8.4□□□□□ -1.07
CNOT1-216ENST00000569240 ZHX1Q9UKY1 873 aaPredicted RBP8.39□□□□□ -1.07
CNOT1-216ENST00000569240 PLIN1O60240 522 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 TNNT1P13805 278 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 ANO10Q9NW15 660 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 NOL7Q9UMY1 257 aaKnown RBP8.39□□□□□ -1.07
CNOT1-216ENST00000569240 XRCC6P12956 609 aaKnown RBP eCLIP8.39□□□□□ -1.07
CNOT1-216ENST00000569240 SMARCC1Q92922 1105 aaPredicted RBP8.39□□□□□ -1.07
CNOT1-216ENST00000569240 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 PANK3Q9H999 370 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 KIF21BO75037 1637 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 PPM1EQ8WY54 764 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 ERICH4A6NGS2 130 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 LRSAM1Q6UWE0 723 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 TMX4Q9H1E5 349 aaPredicted RBP8.39□□□□□ -1.07
CNOT1-216ENST00000569240 EFCC1Q9HA90 598 aa8.39□□□□□ -1.07
CNOT1-216ENST00000569240 GNAI3P08754 354 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 SPECC1LQ69YQ0 1117 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
CNOT1-216ENST00000569240 MKRN1Q9UHC7 482 aaKnown RBP8.38□□□□□ -1.07
CNOT1-216ENST00000569240 EHBP1Q8NDI1 1231 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 BRMS1Q9HCU9 246 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 XBP1P17861 261 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 ST20-MTHFSA0A0A6YYL1 179 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 SARNPP82979 210 aaKnown RBP8.38□□□□□ -1.07
CNOT1-216ENST00000569240 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-216ENST00000569240 CUX2O14529 1486 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 ERC1Q8IUD2 1116 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 NOLC1Q14978 699 aaKnown RBP eCLIP8.38□□□□□ -1.072e-6■■■□□ 15.5
CNOT1-216ENST00000569240 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
CNOT1-216ENST00000569240 CNTROBQ8N137 903 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 ARFGAP3Q9NP61 516 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 SWAP70Q9UH65 585 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 SPATS2Q86XZ4 545 aaKnown RBP8.37□□□□□ -1.07
CNOT1-216ENST00000569240 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 KRT32Q14532 448 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 ARFGAP2Q8N6H7 521 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 CTCFLQ8NI51 663 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-216ENST00000569240 RILPL2Q969X0 211 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 TMCO5BA8MYB1 307 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 APAF1O14727 1248 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 KIF5CO60282 957 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 MYOM3Q5VTT5 1437 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.076e-8■■■■□ 19.3
CNOT1-216ENST00000569240 NEK4P51957 841 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 WDR66Q8TBY9 1149 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 INSRP06213 1382 aa8.37□□□□□ -1.07
CNOT1-216ENST00000569240 SLU7O95391 586 aaKnown RBP8.36□□□□□ -1.07
CNOT1-216ENST00000569240 HSPA4P34932 840 aa8.36□□□□□ -1.07
CNOT1-216ENST00000569240 TBC1D32Q96NH3 1257 aa8.36□□□□□ -1.07
CNOT1-216ENST00000569240 TRDNQ13061 729 aa8.36□□□□□ -1.07
CNOT1-216ENST00000569240 MYRIPQ8NFW9 859 aa8.36□□□□□ -1.07
CNOT1-216ENST00000569240 BCL11BQ9C0K0 894 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-216ENST00000569240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.36□□□□□ -1.07
CNOT1-216ENST00000569240 SMC1AQ14683 1233 aaKnown RBP8.36□□□□□ -1.07
CNOT1-216ENST00000569240 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-216ENST00000569240 CCDC181Q5TID7 509 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms