RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MAGI1Q96QZ7 1491 aaPredicted RBP12.68□□□□□ -0.38
CDH11-216ENST00000569128 TSC1Q92574 1164 aa12.68□□□□□ -0.38
CDH11-216ENST00000569128 PCDHB3Q9Y5E6 796 aa12.68□□□□□ -0.38
CDH11-216ENST00000569128 KIF21BO75037 1637 aa12.68□□□□□ -0.38
CDH11-216ENST00000569128 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
CDH11-216ENST00000569128 CHMP7Q8WUX9 453 aaPredicted RBP12.67□□□□□ -0.38
CDH11-216ENST00000569128 USP17L8P0C7I0 530 aa12.66□□□□□ -0.38
CDH11-216ENST00000569128 MTMR14Q8NCE2 650 aa12.66□□□□□ -0.38
CDH11-216ENST00000569128 POM121Q96HA1 1249 aa12.66□□□□□ -0.38
CDH11-216ENST00000569128 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
CDH11-216ENST00000569128 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
CDH11-216ENST00000569128 Q3C1V9 767 aa12.65□□□□□ -0.38
CDH11-216ENST00000569128 PRR7Q8TB68 274 aa12.65□□□□□ -0.38
CDH11-216ENST00000569128 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
CDH11-216ENST00000569128 BLOC1S3Q6QNY0 202 aa12.64□□□□□ -0.39
CDH11-216ENST00000569128 RNF19BQ6ZMZ0 732 aa12.64□□□□□ -0.39
CDH11-216ENST00000569128 SCUBE3Q8IX30 993 aa12.64□□□□□ -0.39
CDH11-216ENST00000569128 HELBQ8NG08 1087 aaPredicted RBP12.64□□□□□ -0.39
CDH11-216ENST00000569128 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
CDH11-216ENST00000569128 GRIN2AQ12879 1464 aa12.63□□□□□ -0.39
CDH11-216ENST00000569128 A6NJR5 290 aa12.62□□□□□ -0.39
CDH11-216ENST00000569128 RAD21O60216 631 aa12.62□□□□□ -0.39
CDH11-216ENST00000569128 NR1I2O75469 434 aa12.62□□□□□ -0.39
CDH11-216ENST00000569128 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
CDH11-216ENST00000569128 CHD1O14646 1710 aa12.61□□□□□ -0.39
CDH11-216ENST00000569128 PTPN5P54829 565 aa12.6□□□□□ -0.39
CDH11-216ENST00000569128 BRICD5Q6PL45 260 aa12.6□□□□□ -0.39
CDH11-216ENST00000569128 COPS2P61201 443 aa12.59□□□□□ -0.39
CDH11-216ENST00000569128 LRRN4Q8WUT4 740 aa12.59□□□□□ -0.39
CDH11-216ENST00000569128 TNIKQ9UKE5 1360 aa12.58□□□□□ -0.4
CDH11-216ENST00000569128 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
CDH11-216ENST00000569128 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
CDH11-216ENST00000569128 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
CDH11-216ENST00000569128 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
CDH11-216ENST00000569128 CEP170Q5SW79 1584 aa12.57□□□□□ -0.4
CDH11-216ENST00000569128 THAP11Q96EK4 314 aa12.57□□□□□ -0.4
CDH11-216ENST00000569128 GDPD2Q9HCC8 539 aa12.57□□□□□ -0.4
CDH11-216ENST00000569128 SOCS7O14512 581 aa12.56□□□□□ -0.4
CDH11-216ENST00000569128 TRAK2O60296 914 aa12.56□□□□□ -0.4
CDH11-216ENST00000569128 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
CDH11-216ENST00000569128 ARID3AQ99856 593 aa12.56□□□□□ -0.4
CDH11-216ENST00000569128 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
CDH11-216ENST00000569128 NUP160Q12769 1436 aa12.55□□□□□ -0.4
CDH11-216ENST00000569128 APBB1O00213 710 aa12.55□□□□□ -0.4
CDH11-216ENST00000569128 PER1O15534 1290 aaPredicted RBP12.55□□□□□ -0.4
CDH11-216ENST00000569128 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
CDH11-216ENST00000569128 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
CDH11-216ENST00000569128 ARID3CA6NKF2 412 aa12.54□□□□□ -0.4
CDH11-216ENST00000569128 GJD4Q96KN9 370 aaPredicted RBP12.54□□□□□ -0.4
CDH11-216ENST00000569128 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
CDH11-216ENST00000569128 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
CDH11-216ENST00000569128 ABL2P42684 1182 aa12.52□□□□□ -0.41
CDH11-216ENST00000569128 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
CDH11-216ENST00000569128 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.41
CDH11-216ENST00000569128 MTRQ99707 1265 aa12.52□□□□□ -0.41
CDH11-216ENST00000569128 TRIM34Q9BYJ4 488 aa12.52□□□□□ -0.41
CDH11-216ENST00000569128 PRM3Q9NNZ6 103 aa12.52□□□□□ -0.41
CDH11-216ENST00000569128 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.41
CDH11-216ENST00000569128 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
CDH11-216ENST00000569128 SPSB2Q99619 263 aa12.51□□□□□ -0.41
CDH11-216ENST00000569128 TLL1O43897 1013 aa12.5□□□□□ -0.41
CDH11-216ENST00000569128 EPS8L1Q8TE68 723 aa12.5□□□□□ -0.41
CDH11-216ENST00000569128 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
CDH11-216ENST00000569128 CEP162Q5TB80 1403 aa12.49□□□□□ -0.41
CDH11-216ENST00000569128 LYPD8Q6UX82 237 aa12.49□□□□□ -0.41
CDH11-216ENST00000569128 FAM160A2Q8N612 972 aaPredicted RBP12.49□□□□□ -0.41
CDH11-216ENST00000569128 IQGAP2Q13576 1575 aa12.48□□□□□ -0.41
CDH11-216ENST00000569128 ZPR1O75312 459 aa12.48□□□□□ -0.41
CDH11-216ENST00000569128 JUNDP17535 347 aa12.48□□□□□ -0.41
CDH11-216ENST00000569128 NR6A1Q15406 480 aa12.48□□□□□ -0.41
CDH11-216ENST00000569128 ZNF777Q9ULD5 760 aaPredicted RBP12.48□□□□□ -0.41
CDH11-216ENST00000569128 TJAP1Q5JTD0 557 aa12.47□□□□□ -0.41
CDH11-216ENST00000569128 ZNF516Q92618 1163 aa12.47□□□□□ -0.41
CDH11-216ENST00000569128 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
CDH11-216ENST00000569128 CLIP1P30622 1438 aa12.46□□□□□ -0.41
CDH11-216ENST00000569128 MSS51Q4VC12 460 aa12.46□□□□□ -0.41
CDH11-216ENST00000569128 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.41
CDH11-216ENST00000569128 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
CDH11-216ENST00000569128 IL21Q9HBE4 155 aa12.45□□□□□ -0.42
CDH11-216ENST00000569128 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
CDH11-216ENST00000569128 ADH1BP00325 375 aa12.44□□□□□ -0.42
CDH11-216ENST00000569128 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
CDH11-216ENST00000569128 GPR37L1O60883 481 aa12.43□□□□□ -0.42
CDH11-216ENST00000569128 PTPRNQ16849 979 aa12.43□□□□□ -0.42
CDH11-216ENST00000569128 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
CDH11-216ENST00000569128 DXOO77932 396 aaKnown RBP12.42□□□□□ -0.42
CDH11-216ENST00000569128 IRF5Q13568 498 aa12.42□□□□□ -0.42
CDH11-216ENST00000569128 ERCC6L2Q5T890 1561 aa12.42□□□□□ -0.42
CDH11-216ENST00000569128 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
CDH11-216ENST00000569128 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
CDH11-216ENST00000569128 SPNS2Q8IVW8 549 aa12.41□□□□□ -0.42
CDH11-216ENST00000569128 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
CDH11-216ENST00000569128 RNF166Q96A37 237 aaPredicted RBP12.41□□□□□ -0.42
CDH11-216ENST00000569128 PCDH10Q9P2E7 1040 aa12.41□□□□□ -0.42
CDH11-216ENST00000569128 MAP10Q9P2G4 905 aa12.41□□□□□ -0.42
CDH11-216ENST00000569128 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
CDH11-216ENST00000569128 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
CDH11-216ENST00000569128 MMP16P51512 607 aa12.4□□□□□ -0.42
CDH11-216ENST00000569128 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
CDH11-216ENST00000569128 F12P00748 615 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms