RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 RIMBP3CA6NJZ7 1639 aa10.73□□□□□ -0.69
MSH5-219ENST00000497269 RIMBP3BA6NNM3 1639 aa10.73□□□□□ -0.69
MSH5-219ENST00000497269 RIMBP3Q9UFD9 1639 aa10.73□□□□□ -0.69
MSH5-219ENST00000497269 TMEM259Q4ZIN3 620 aa10.72□□□□□ -0.69
MSH5-219ENST00000497269 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
MSH5-219ENST00000497269 SUPT5HO00267 1087 aaKnown RBP10.7□□□□□ -0.7
MSH5-219ENST00000497269 HMX1Q9NP08 348 aaPredicted RBP10.7□□□□□ -0.7
MSH5-219ENST00000497269 EIF4G3O43432 1585 aaKnown RBP10.69□□□□□ -0.7
MSH5-219ENST00000497269 TDRD9Q8NDG6 1382 aaKnown RBP10.69□□□□□ -0.7
MSH5-219ENST00000497269 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
MSH5-219ENST00000497269 CTHP32929 405 aa10.69□□□□□ -0.7
MSH5-219ENST00000497269 PPP1R18Q6NYC8 613 aa10.69□□□□□ -0.7
MSH5-219ENST00000497269 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
MSH5-219ENST00000497269 FCF1Q9Y324 198 aaKnown RBP10.69□□□□□ -0.7
MSH5-219ENST00000497269 DNMBPQ6XZF7 1577 aa10.68□□□□□ -0.7
MSH5-219ENST00000497269 MMP16P51512 607 aa10.67□□□□□ -0.7
MSH5-219ENST00000497269 MCM6Q14566 821 aa10.67□□□□□ -0.7
MSH5-219ENST00000497269 LYPD8Q6UX82 237 aa10.67□□□□□ -0.7
MSH5-219ENST00000497269 MAP10Q9P2G4 905 aa10.67□□□□□ -0.7
MSH5-219ENST00000497269 RNF223E7ERA6 249 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 NR6A1Q15406 480 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 DESI1Q6ICB0 168 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 MTMR14Q8NCE2 650 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 BANK1Q8NDB2 785 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 EPS8L1Q8TE68 723 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 ARHGEF11O15085 1522 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 CHD1O14646 1710 aa10.66□□□□□ -0.7
MSH5-219ENST00000497269 CCNYL3P0C7X3 344 aa10.65□□□□□ -0.7
MSH5-219ENST00000497269 GGCXP38435 758 aa10.65□□□□□ -0.7
MSH5-219ENST00000497269 PTPRNQ16849 979 aa10.65□□□□□ -0.7
MSH5-219ENST00000497269 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.65□□□□□ -0.7
MSH5-219ENST00000497269 POLA1P09884 1462 aaPredicted RBP10.65□□□□□ -0.7
MSH5-219ENST00000497269 SOGA1O94964 1423 aa10.65□□□□□ -0.7
MSH5-219ENST00000497269 TARBP1Q13395 1621 aaKnown RBP10.65□□□□□ -0.7
MSH5-219ENST00000497269 ABCC8Q09428 1581 aa10.65□□□□□ -0.71
MSH5-219ENST00000497269 FLIIQ13045 1269 aa10.63□□□□□ -0.71
MSH5-219ENST00000497269 C14orf37Q86TY3 774 aa10.63□□□□□ -0.71
MSH5-219ENST00000497269 UBTFP17480 764 aaKnown RBP10.62□□□□□ -0.71
MSH5-219ENST00000497269 PLA2G2CQ5R387 149 aa10.61□□□□□ -0.71
MSH5-219ENST00000497269 PTCRAQ6ISU1 281 aaPredicted RBP10.61□□□□□ -0.71
MSH5-219ENST00000497269 POM121Q96HA1 1249 aa10.61□□□□□ -0.71
MSH5-219ENST00000497269 KCNH2Q12809 1159 aa10.6□□□□□ -0.71
MSH5-219ENST00000497269 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
MSH5-219ENST00000497269 CLUAP1Q96AJ1 413 aa10.6□□□□□ -0.71
MSH5-219ENST00000497269 FGD5Q6ZNL6 1462 aa10.6□□□□□ -0.71
MSH5-219ENST00000497269 F12P00748 615 aaPredicted RBP10.59□□□□□ -0.71
MSH5-219ENST00000497269 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
MSH5-219ENST00000497269 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
MSH5-219ENST00000497269 EVA1BQ9NVM1 165 aa10.59□□□□□ -0.71
MSH5-219ENST00000497269 TBC1D2BQ9UPU7 963 aa10.59□□□□□ -0.71
MSH5-219ENST00000497269 SNAPC4Q5SXM2 1469 aa10.58□□□□□ -0.72
MSH5-219ENST00000497269 LINC01559Q495D7 138 aa10.58□□□□□ -0.72
MSH5-219ENST00000497269 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
MSH5-219ENST00000497269 UNC93B1Q9H1C4 597 aa10.58□□□□□ -0.72
MSH5-219ENST00000497269 GDPD2Q9HCC8 539 aa10.58□□□□□ -0.72
MSH5-219ENST00000497269 CUX1P39880 1505 aa10.58□□□□□ -0.72
MSH5-219ENST00000497269 A0A0G2JS52 829 aa10.57□□□□□ -0.72
MSH5-219ENST00000497269 ABL2P42684 1182 aa10.57□□□□□ -0.72
MSH5-219ENST00000497269 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
MSH5-219ENST00000497269 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
MSH5-219ENST00000497269 ZBTB24O43167 697 aaPredicted RBP10.56□□□□□ -0.72
MSH5-219ENST00000497269 IFFO2Q5TF58 517 aa10.56□□□□□ -0.72
MSH5-219ENST00000497269 NDUFB9Q9Y6M9 179 aa10.55□□□□□ -0.72
MSH5-219ENST00000497269 APBB1O00213 710 aa10.54□□□□□ -0.72
MSH5-219ENST00000497269 RAD21O60216 631 aa10.54□□□□□ -0.72
MSH5-219ENST00000497269 COG6Q9Y2V7 657 aa10.54□□□□□ -0.72
MSH5-219ENST00000497269 BAP1Q92560 729 aa10.53□□□□□ -0.72
MSH5-219ENST00000497269 LIAT1Q6ZQX7 453 aa10.52□□□□□ -0.73
MSH5-219ENST00000497269 PRM3Q9NNZ6 103 aa10.52□□□□□ -0.73
MSH5-219ENST00000497269 FKBPLQ9UIM3 349 aa10.52□□□□□ -0.73
MSH5-219ENST00000497269 TRIM32Q13049 653 aa10.5□□□□□ -0.73
MSH5-219ENST00000497269 EMID1Q96A84 441 aaPredicted RBP10.5□□□□□ -0.73
MSH5-219ENST00000497269 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
MSH5-219ENST00000497269 SLC19A1P41440 591 aa10.49□□□□□ -0.73
MSH5-219ENST00000497269 AGERQ15109 404 aa10.49□□□□□ -0.73
MSH5-219ENST00000497269 PNMA1Q8ND90 353 aa10.49□□□□□ -0.73
MSH5-219ENST00000497269 PRKD2Q9BZL6 878 aa10.49□□□□□ -0.73
MSH5-219ENST00000497269 GAPVD1Q14C86 1478 aa10.48□□□□□ -0.73
MSH5-219ENST00000497269 GPR37L1O60883 481 aa10.47□□□□□ -0.73
MSH5-219ENST00000497269 ARMC2Q8NEN0 867 aa10.47□□□□□ -0.73
MSH5-219ENST00000497269 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
MSH5-219ENST00000497269 CARD14Q9BXL6 1004 aa10.47□□□□□ -0.73
MSH5-219ENST00000497269 PBRM1Q86U86 1689 aa10.47□□□□□ -0.73
MSH5-219ENST00000497269 MAGEB6P1A0A0J9YX57 407 aa10.46□□□□□ -0.73
MSH5-219ENST00000497269 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
MSH5-219ENST00000497269 ZNF511Q8NB15 262 aa10.46□□□□□ -0.73
MSH5-219ENST00000497269 ZMYND15Q9H091 742 aa10.46□□□□□ -0.73
MSH5-219ENST00000497269 SYNJ2O15056 1496 aa10.46□□□□□ -0.74
MSH5-219ENST00000497269 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.74
MSH5-219ENST00000497269 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
MSH5-219ENST00000497269 MAGI1Q96QZ7 1491 aaPredicted RBP10.45□□□□□ -0.74
MSH5-219ENST00000497269 SOCS7O14512 581 aa10.45□□□□□ -0.74
MSH5-219ENST00000497269 SH3BP2P78314 561 aa10.45□□□□□ -0.74
MSH5-219ENST00000497269 VAC14Q08AM6 782 aa10.45□□□□□ -0.74
MSH5-219ENST00000497269 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
MSH5-219ENST00000497269 WDR97A6NE52 1622 aa10.44□□□□□ -0.74
MSH5-219ENST00000497269 RPIAP49247 311 aa10.44□□□□□ -0.74
MSH5-219ENST00000497269 SKOR1P84550 965 aa10.44□□□□□ -0.74
MSH5-219ENST00000497269 IRF5Q13568 498 aa10.44□□□□□ -0.74
MSH5-219ENST00000497269 CD2BP2O95400 341 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms