RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 GDF9O60383 454 aa8.66□□□□□ -1.02
ATPAF1-204ENST00000474020 CD2BP2O95400 341 aaKnown RBP8.66□□□□□ -1.02
ATPAF1-204ENST00000474020 JUNDP17535 347 aa8.66□□□□□ -1.02
ATPAF1-204ENST00000474020 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
ATPAF1-204ENST00000474020 EFCAB5A4FU69 1503 aa8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 MAP3K1Q13233 1512 aa8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 ARHGAP35Q9NRY4 1499 aa8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 ZBTB24O43167 697 aaPredicted RBP8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 GJA5P36382 358 aa8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 TRAF7Q6Q0C0 670 aa8.65□□□□□ -1.02
ATPAF1-204ENST00000474020 CLSPNQ9HAW4 1339 aa8.63□□□□□ -1.03
ATPAF1-204ENST00000474020 LCE2BO14633 110 aa8.63□□□□□ -1.03
ATPAF1-204ENST00000474020 RSBN1LQ6PCB5 846 aaPredicted RBP8.63□□□□□ -1.03
ATPAF1-204ENST00000474020 NESP48681 1621 aa8.62□□□□□ -1.03
ATPAF1-204ENST00000474020 TNFRSF10AO00220 468 aa8.62□□□□□ -1.03
ATPAF1-204ENST00000474020 MTMR2Q13614 643 aa8.62□□□□□ -1.03
ATPAF1-204ENST00000474020 PKD2L1Q9P0L9 805 aa8.62□□□□□ -1.03
ATPAF1-204ENST00000474020 SPDYE5A6NIY4 337 aa8.61□□□□□ -1.03
ATPAF1-204ENST00000474020 SPTLC1O15269 473 aa8.61□□□□□ -1.03
ATPAF1-204ENST00000474020 DGAT1O75907 488 aa8.61□□□□□ -1.03
ATPAF1-204ENST00000474020 TRIM32Q13049 653 aa8.61□□□□□ -1.03
ATPAF1-204ENST00000474020 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
ATPAF1-204ENST00000474020 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
ATPAF1-204ENST00000474020 RRBP1Q9P2E9 1410 aaKnown RBP8.61□□□□□ -1.03
ATPAF1-204ENST00000474020 FOXC1Q12948 553 aa8.6□□□□□ -1.03
ATPAF1-204ENST00000474020 PKDCCQ504Y2 493 aa8.6□□□□□ -1.03
ATPAF1-204ENST00000474020 NUDT12Q9BQG2 462 aa8.6□□□□□ -1.03
ATPAF1-204ENST00000474020 CCNB3Q8WWL7 1395 aa8.6□□□□□ -1.03
ATPAF1-204ENST00000474020 URB2Q14146 1524 aaKnown RBP8.59□□□□□ -1.03
ATPAF1-204ENST00000474020 ERCC6Q03468 1493 aa8.59□□□□□ -1.03
ATPAF1-204ENST00000474020 RIC3Q7Z5B4 369 aa8.59□□□□□ -1.03
ATPAF1-204ENST00000474020 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
ATPAF1-204ENST00000474020 FMN1Q68DA7 1419 aa8.59□□□□□ -1.03
ATPAF1-204ENST00000474020 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
ATPAF1-204ENST00000474020 AQRO60306 1485 aaKnown RBP eCLIP8.58□□□□□ -1.04
ATPAF1-204ENST00000474020 GAPVD1Q14C86 1478 aa8.58□□□□□ -1.04
ATPAF1-204ENST00000474020 FYCO1Q9BQS8 1478 aa8.58□□□□□ -1.04
ATPAF1-204ENST00000474020 DESI1Q6ICB0 168 aa8.58□□□□□ -1.04
ATPAF1-204ENST00000474020 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
ATPAF1-204ENST00000474020 CTTNBP2Q8WZ74 1663 aa8.57□□□□□ -1.04
ATPAF1-204ENST00000474020 PTPRNQ16849 979 aa8.57□□□□□ -1.04
ATPAF1-204ENST00000474020 PRPF38BQ5VTL8 546 aaKnown RBP8.57□□□□□ -1.04
ATPAF1-204ENST00000474020 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
ATPAF1-204ENST00000474020 ZBTB3Q9H5J0 574 aa8.57□□□□□ -1.04
ATPAF1-204ENST00000474020 WDR97A6NE52 1622 aa8.57□□□□□ -1.04
ATPAF1-204ENST00000474020 ABCA5Q8WWZ7 1642 aa8.57□□□□□ -1.04
ATPAF1-204ENST00000474020 FAM187AA6NFU0 413 aa8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 WNT7AO00755 349 aa8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 CCNYL3P0C7X3 344 aa8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 TUSC1Q2TAM9 212 aa8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 KANK4Q5T7N3 995 aaPredicted RBP8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 DIEXFQ68CQ4 756 aaKnown RBP8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 TOR4AQ9NXH8 423 aa8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 ATP1B4Q9UN42 357 aaPredicted RBP8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 MRC2Q9UBG0 1479 aa8.56□□□□□ -1.04
ATPAF1-204ENST00000474020 CASKIN1Q8WXD9 1431 aa8.55□□□□□ -1.04
ATPAF1-204ENST00000474020 WNT7BP56706 349 aa8.55□□□□□ -1.04
ATPAF1-204ENST00000474020 CYP4X1Q8N118 509 aa8.55□□□□□ -1.04
ATPAF1-204ENST00000474020 LIMD1Q9UGP4 676 aa8.55□□□□□ -1.04
ATPAF1-204ENST00000474020 LRRC9Q6ZRR7 1453 aa8.55□□□□□ -1.04
ATPAF1-204ENST00000474020 CFAP43Q8NDM7 1665 aa8.55□□□□□ -1.04
ATPAF1-204ENST00000474020 PCF11O94913 1555 aaKnown RBP8.54□□□□□ -1.04
ATPAF1-204ENST00000474020 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
ATPAF1-204ENST00000474020 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
ATPAF1-204ENST00000474020 EVA1BQ9NVM1 165 aa8.54□□□□□ -1.04
ATPAF1-204ENST00000474020 TDRD9Q8NDG6 1382 aaKnown RBP8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 CFAP99D6REC4 459 aa8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 CENPBP07199 599 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 SKOR1P84550 965 aa8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 MYT1Q01538 1121 aa8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 CSPP1Q1MSJ5 1256 aa8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 KDM4CQ9H3R0 1056 aa8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 FHOD3Q2V2M9 1422 aa8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 KIF21AQ7Z4S6 1674 aa8.53□□□□□ -1.04
ATPAF1-204ENST00000474020 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
ATPAF1-204ENST00000474020 KCNH2Q12809 1159 aa8.52□□□□□ -1.05
ATPAF1-204ENST00000474020 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
ATPAF1-204ENST00000474020 GPBP1L1Q9HC44 474 aaPredicted RBP8.52□□□□□ -1.05
ATPAF1-204ENST00000474020 THOC2Q8NI27 1593 aaKnown RBP8.52□□□□□ -1.05
ATPAF1-204ENST00000474020 LYPD8Q6UX82 237 aa8.51□□□□□ -1.05
ATPAF1-204ENST00000474020 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
ATPAF1-204ENST00000474020 UNC93B1Q9H1C4 597 aa8.51□□□□□ -1.05
ATPAF1-204ENST00000474020 IFT140Q96RY7 1462 aa8.51□□□□□ -1.05
ATPAF1-204ENST00000474020 MTUS2Q5JR59 1369 aa8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 TTC24A2A3L6 582 aaPredicted RBP8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 LILRB3O75022 631 aa8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 FAM50AQ14320 339 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 QPCTQ16769 361 aa8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 RC3H1Q5TC82 1133 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 SNIP1Q8TAD8 396 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 DDRGK1Q96HY6 314 aa8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 GRIN2BQ13224 1484 aa8.5□□□□□ -1.05
ATPAF1-204ENST00000474020 DHX57Q6P158 1386 aaKnown RBP8.49□□□□□ -1.05
ATPAF1-204ENST00000474020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATPAF1-204ENST00000474020 NUTM2BA6NNL0 878 aaPredicted RBP8.49□□□□□ -1.05
ATPAF1-204ENST00000474020 NUTM2EB1AL46 878 aaPredicted RBP8.49□□□□□ -1.05
ATPAF1-204ENST00000474020 AVPP01185 164 aa8.49□□□□□ -1.05
ATPAF1-204ENST00000474020 ITGAEP38570 1179 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms