RNA–Protein interactions for RNA: ENST00000469476.2

TRIT1-208, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-208ENST00000469476 RETREG3Q86VR2 466 aa8.25□□□□□ -1.09
TRIT1-208ENST00000469476 LRCH3Q96II8 777 aa8.25□□□□□ -1.09
TRIT1-208ENST00000469476 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.25□□□□□ -1.09
TRIT1-208ENST00000469476 ABCC8Q09428 1581 aa8.25□□□□□ -1.09
TRIT1-208ENST00000469476 SYNJ1O43426 1573 aa8.24□□□□□ -1.09
TRIT1-208ENST00000469476 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
TRIT1-208ENST00000469476 SLC4A3P48751 1232 aa8.24□□□□□ -1.09
TRIT1-208ENST00000469476 APLP1P51693 650 aa8.24□□□□□ -1.09
TRIT1-208ENST00000469476 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
TRIT1-208ENST00000469476 RETREG2Q8NC44 543 aa8.23□□□□□ -1.09
TRIT1-208ENST00000469476 CHMP7Q8WUX9 453 aaPredicted RBP8.23□□□□□ -1.09
TRIT1-208ENST00000469476 ALG2Q9H553 416 aa8.23□□□□□ -1.09
TRIT1-208ENST00000469476 BCAMP50895 628 aa8.22□□□□□ -1.09
TRIT1-208ENST00000469476 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
TRIT1-208ENST00000469476 CFAP70Q5T0N1 1121 aa8.22□□□□□ -1.09
TRIT1-208ENST00000469476 SOWAHBA6NEL2 793 aa8.21□□□□□ -1.1
TRIT1-208ENST00000469476 SRPK2P78362 688 aaKnown RBP8.21□□□□□ -1.1
TRIT1-208ENST00000469476 BRICD5Q6PL45 260 aa8.21□□□□□ -1.1
TRIT1-208ENST00000469476 THAP11Q96EK4 314 aa8.21□□□□□ -1.1
TRIT1-208ENST00000469476 UCN2Q96RP3 112 aa8.21□□□□□ -1.1
TRIT1-208ENST00000469476 TRAIPQ9BWF2 469 aa8.21□□□□□ -1.1
TRIT1-208ENST00000469476 TDRD9Q8NDG6 1382 aaKnown RBP8.21□□□□□ -1.1
TRIT1-208ENST00000469476 SNAPC4Q5SXM2 1469 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 FBXO41Q8TF61 875 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 PCDH10Q9P2E7 1040 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 HPS5Q9UPZ3 1129 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
TRIT1-208ENST00000469476 RFX1P22670 979 aa8.19□□□□□ -1.1
TRIT1-208ENST00000469476 NPM2Q86SE8 214 aaKnown RBP8.19□□□□□ -1.1
TRIT1-208ENST00000469476 SCUBE3Q8IX30 993 aa8.19□□□□□ -1.1
TRIT1-208ENST00000469476 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.18□□□□□ -1.1
TRIT1-208ENST00000469476 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
TRIT1-208ENST00000469476 PPP4CP60510 307 aa8.18□□□□□ -1.1
TRIT1-208ENST00000469476 Q3C1V9 767 aa8.18□□□□□ -1.1
TRIT1-208ENST00000469476 ANKRD13DQ6ZTN6 518 aa8.18□□□□□ -1.1
TRIT1-208ENST00000469476 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
TRIT1-208ENST00000469476 POLA1P09884 1462 aaPredicted RBP8.18□□□□□ -1.1
TRIT1-208ENST00000469476 KIF13AQ9H1H9 1805 aa8.17□□□□□ -1.1
TRIT1-208ENST00000469476 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
TRIT1-208ENST00000469476 PPP1R12CQ9BZL4 782 aa8.17□□□□□ -1.1
TRIT1-208ENST00000469476 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
TRIT1-208ENST00000469476 SALL2Q9Y467 1007 aaPredicted RBP8.17□□□□□ -1.1
TRIT1-208ENST00000469476 MAGI1Q96QZ7 1491 aaPredicted RBP8.17□□□□□ -1.1
TRIT1-208ENST00000469476 RAD54L2Q9Y4B4 1467 aa8.17□□□□□ -1.1
TRIT1-208ENST00000469476 TOP2AP11388 1531 aaKnown RBP8.17□□□□□ -1.1
TRIT1-208ENST00000469476 ERCC6L2Q5T890 1561 aa8.17□□□□□ -1.1
TRIT1-208ENST00000469476 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
TRIT1-208ENST00000469476 TSR3Q9UJK0 312 aaKnown RBP8.16□□□□□ -1.1
TRIT1-208ENST00000469476 SYNJ2O15056 1496 aa8.15□□□□□ -1.1
TRIT1-208ENST00000469476 SOGA1O94964 1423 aa8.15□□□□□ -1.1
TRIT1-208ENST00000469476 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.1
TRIT1-208ENST00000469476 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.1
TRIT1-208ENST00000469476 WNT2BQ93097 391 aa8.15□□□□□ -1.1
TRIT1-208ENST00000469476 WBP1LQ9NX94 342 aa8.15□□□□□ -1.1
TRIT1-208ENST00000469476 PCDHB3Q9Y5E6 796 aa8.15□□□□□ -1.1
TRIT1-208ENST00000469476 CARNS1A5YM72 827 aa8.14□□□□□ -1.11
TRIT1-208ENST00000469476 FAM69CQ0P6D2 419 aa8.14□□□□□ -1.11
TRIT1-208ENST00000469476 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
TRIT1-208ENST00000469476 PBXIP1Q96AQ6 731 aa8.14□□□□□ -1.11
TRIT1-208ENST00000469476 TFIP11Q9UBB9 837 aaKnown RBP8.14□□□□□ -1.11
TRIT1-208ENST00000469476 HECW2Q9P2P5 1572 aa8.14□□□□□ -1.11
TRIT1-208ENST00000469476 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 FMNL1O95466 1100 aaPredicted RBP8.13□□□□□ -1.11
TRIT1-208ENST00000469476 FBXO45P0C2W1 286 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 JUNDP17535 347 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 PRR14Q9BWN1 585 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 GRIN2BQ13224 1484 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 ABCC10Q5T3U5 1492 aa8.13□□□□□ -1.11
TRIT1-208ENST00000469476 WDR97A6NE52 1622 aa8.12□□□□□ -1.11
TRIT1-208ENST00000469476 TBC1D9Q6ZT07 1266 aa8.12□□□□□ -1.11
TRIT1-208ENST00000469476 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
TRIT1-208ENST00000469476 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
TRIT1-208ENST00000469476 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
TRIT1-208ENST00000469476 NR1H3Q13133 447 aa8.11□□□□□ -1.11
TRIT1-208ENST00000469476 OCSTAMPQ9BR26 566 aa8.11□□□□□ -1.11
TRIT1-208ENST00000469476 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
TRIT1-208ENST00000469476 CCDC88BA6NC98 1476 aa8.11□□□□□ -1.11
TRIT1-208ENST00000469476 LMTK3Q96Q04 1460 aa8.11□□□□□ -1.11
TRIT1-208ENST00000469476 KDM6BO15054 1643 aa8.11□□□□□ -1.11
TRIT1-208ENST00000469476 PIK3CDO00329 1044 aa8.1□□□□□ -1.11
TRIT1-208ENST00000469476 NR1I2O75469 434 aa8.1□□□□□ -1.11
TRIT1-208ENST00000469476 SEMA3FQ13275 785 aa8.1□□□□□ -1.11
TRIT1-208ENST00000469476 PTPRNQ16849 979 aa8.1□□□□□ -1.11
TRIT1-208ENST00000469476 CDCA8Q53HL2 280 aa8.1□□□□□ -1.11
TRIT1-208ENST00000469476 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
TRIT1-208ENST00000469476 ADGRL1O94910 1474 aa8.09□□□□□ -1.11
TRIT1-208ENST00000469476 SOX11P35716 441 aa8.09□□□□□ -1.11
TRIT1-208ENST00000469476 COPS2P61201 443 aa8.09□□□□□ -1.11
TRIT1-208ENST00000469476 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
TRIT1-208ENST00000469476 STAC3Q96MF2 364 aa8.09□□□□□ -1.11
TRIT1-208ENST00000469476 MAFBQ9Y5Q3 323 aaPredicted RBP8.09□□□□□ -1.11
TRIT1-208ENST00000469476 ZBBXA8MT70 800 aa8.08□□□□□ -1.12
TRIT1-208ENST00000469476 TLL1O43897 1013 aa8.08□□□□□ -1.12
TRIT1-208ENST00000469476 DXOO77932 396 aaKnown RBP8.08□□□□□ -1.12
TRIT1-208ENST00000469476 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms