RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 GPRASP1Q5JY77 1395 aa15.61■□□□□ 0.09
USP41-202ENST00000454608 RREB1Q92766 1687 aa15.6■□□□□ 0.09
USP41-202ENST00000454608 PPARGC1BQ86YN6 1023 aaKnown RBP15.6■□□□□ 0.09
USP41-202ENST00000454608 PMFBP1Q8TBY8 1022 aa15.6■□□□□ 0.09
USP41-202ENST00000454608 DLC1Q96QB1 1528 aa15.59■□□□□ 0.09
USP41-202ENST00000454608 EIF3AQ14152 1382 aaKnown RBP15.59■□□□□ 0.09
USP41-202ENST00000454608 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
USP41-202ENST00000454608 NUP188Q5SRE5 1749 aa15.57■□□□□ 0.08
USP41-202ENST00000454608 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
USP41-202ENST00000454608 TRIM37O94972 964 aa15.57■□□□□ 0.08
USP41-202ENST00000454608 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
USP41-202ENST00000454608 NBPF14Q5TI25 921 aa15.57■□□□□ 0.08
USP41-202ENST00000454608 SPATA31A1Q5TZJ5 1347 aa15.57■□□□□ 0.08
USP41-202ENST00000454608 APBA3O96018 575 aa15.56■□□□□ 0.08
USP41-202ENST00000454608 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
USP41-202ENST00000454608 PRDM11Q9NQV5 511 aa15.56■□□□□ 0.08
USP41-202ENST00000454608 POGKQ9P215 609 aa15.56■□□□□ 0.08
USP41-202ENST00000454608 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
USP41-202ENST00000454608 CFAP70Q5T0N1 1121 aa15.55■□□□□ 0.08
USP41-202ENST00000454608 TULP4Q9NRJ4 1543 aa15.53■□□□□ 0.08
USP41-202ENST00000454608 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
USP41-202ENST00000454608 ITSN1Q15811 1721 aa15.53■□□□□ 0.08
USP41-202ENST00000454608 NINLQ9Y2I6 1382 aa15.52■□□□□ 0.08
USP41-202ENST00000454608 SPON1Q9HCB6 807 aa15.52■□□□□ 0.08
USP41-202ENST00000454608 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.08
USP41-202ENST00000454608 PHRF1Q9P1Y6 1649 aaKnown RBP15.52■□□□□ 0.08
USP41-202ENST00000454608 PDE3BQ13370 1112 aa15.51■□□□□ 0.07
USP41-202ENST00000454608 BARGINQ6ZT62 677 aa15.51■□□□□ 0.07
USP41-202ENST00000454608 NGDNQ8NEJ9 315 aaKnown RBP15.51■□□□□ 0.07
USP41-202ENST00000454608 KIAA0232Q92628 1395 aa15.5■□□□□ 0.07
USP41-202ENST00000454608 PAK3O75914 559 aaPredicted RBP15.5■□□□□ 0.07
USP41-202ENST00000454608 PRR36Q9H6K5 1346 aa15.49■□□□□ 0.07
USP41-202ENST00000454608 C11orf95C9JLR9 678 aaPredicted RBP15.49■□□□□ 0.07
USP41-202ENST00000454608 KCNQ2O43526 872 aa15.49■□□□□ 0.07
USP41-202ENST00000454608 STRN4Q9NRL3 753 aa15.49■□□□□ 0.07
USP41-202ENST00000454608 RGPD3A6NKT7 1758 aaPredicted RBP15.49■□□□□ 0.07
USP41-202ENST00000454608 RGPD4Q7Z3J3 1758 aa15.49■□□□□ 0.07
USP41-202ENST00000454608 ATP7BP35670 1465 aa15.48■□□□□ 0.07
USP41-202ENST00000454608 WASLO00401 505 aaPredicted RBP15.48■□□□□ 0.07
USP41-202ENST00000454608 ADGRB1O14514 1584 aa15.48■□□□□ 0.07
USP41-202ENST00000454608 EVA1CP58658 441 aa15.47■□□□□ 0.07
USP41-202ENST00000454608 HIRIP3Q9BW71 556 aaPredicted RBP15.47■□□□□ 0.07
USP41-202ENST00000454608 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
USP41-202ENST00000454608 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
USP41-202ENST00000454608 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
USP41-202ENST00000454608 PARP4Q9UKK3 1724 aaKnown RBP15.46■□□□□ 0.06
USP41-202ENST00000454608 USP35Q9P2H5 1018 aa15.45■□□□□ 0.06
USP41-202ENST00000454608 TRAK1Q9UPV9 953 aa15.45■□□□□ 0.06
USP41-202ENST00000454608 THRAP3Q9Y2W1 955 aaKnown RBP15.45■□□□□ 0.06
USP41-202ENST00000454608 TCP11L2Q8N4U5 519 aa15.44■□□□□ 0.06
USP41-202ENST00000454608 SBF2Q86WG5 1849 aa15.43■□□□□ 0.06
USP41-202ENST00000454608 ZC3H6P61129 1189 aaKnown RBP15.43■□□□□ 0.06
USP41-202ENST00000454608 LMO7Q8WWI1 1683 aa15.43■□□□□ 0.06
USP41-202ENST00000454608 CAMTA1Q9Y6Y1 1673 aa15.43■□□□□ 0.06
USP41-202ENST00000454608 CASZ1Q86V15 1759 aa15.41■□□□□ 0.06
USP41-202ENST00000454608 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
USP41-202ENST00000454608 CPDO75976 1380 aa15.41■□□□□ 0.06
USP41-202ENST00000454608 CHD4Q14839 1912 aa15.41■□□□□ 0.06
USP41-202ENST00000454608 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
USP41-202ENST00000454608 PLSCR1O15162 318 aa15.4■□□□□ 0.06
USP41-202ENST00000454608 LARP1Q6PKG0 1096 aaKnown RBP15.4■□□□□ 0.06
USP41-202ENST00000454608 NUDT16Q96DE0 195 aaKnown RBP15.4■□□□□ 0.06
USP41-202ENST00000454608 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
USP41-202ENST00000454608 POLR3AO14802 1390 aaPredicted RBP15.39■□□□□ 0.05
USP41-202ENST00000454608 TOPAZ1Q8N9V7 1692 aa15.39■□□□□ 0.05
USP41-202ENST00000454608 OVOS2A0A0G2JMS6 1433 aa15.39■□□□□ 0.05
USP41-202ENST00000454608 OVOS2A0A0J9YW53 1432 aa15.39■□□□□ 0.05
USP41-202ENST00000454608 OVOS2Q6IE36 1432 aa15.39■□□□□ 0.05
USP41-202ENST00000454608 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
USP41-202ENST00000454608 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
USP41-202ENST00000454608 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
USP41-202ENST00000454608 ZNF784Q8NCA9 323 aaPredicted RBP15.36■□□□□ 0.05
USP41-202ENST00000454608 CRB1P82279 1406 aa15.35■□□□□ 0.05
USP41-202ENST00000454608 MYOM1P52179 1685 aa15.35■□□□□ 0.05
USP41-202ENST00000454608 COL5A2P05997 1499 aaPredicted RBP15.35■□□□□ 0.05
USP41-202ENST00000454608 USP19O94966 1318 aa15.35■□□□□ 0.05
USP41-202ENST00000454608 ACEP12821 1306 aa15.35■□□□□ 0.05
USP41-202ENST00000454608 LRRC37A3O60309 1634 aa15.35■□□□□ 0.05
USP41-202ENST00000454608 PLEKHG3A1L390 1219 aa15.34■□□□□ 0.05
USP41-202ENST00000454608 NLRP13Q86W25 1043 aa15.34■□□□□ 0.05
USP41-202ENST00000454608 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
USP41-202ENST00000454608 AKAP12Q02952 1782 aa15.34■□□□□ 0.05
USP41-202ENST00000454608 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.05
USP41-202ENST00000454608 CDK19Q9BWU1 502 aa15.33■□□□□ 0.04
USP41-202ENST00000454608 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.04
USP41-202ENST00000454608 ANO8Q9HCE9 1232 aaPredicted RBP15.33■□□□□ 0.04
USP41-202ENST00000454608 GCP02774 474 aa15.32■□□□□ 0.04
USP41-202ENST00000454608 DDB1Q16531 1140 aa15.32■□□□□ 0.04
USP41-202ENST00000454608 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
USP41-202ENST00000454608 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
USP41-202ENST00000454608 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
USP41-202ENST00000454608 BCL9O00512 1426 aa15.31■□□□□ 0.04
USP41-202ENST00000454608 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
USP41-202ENST00000454608 PTGER2P43116 358 aa15.3■□□□□ 0.04
USP41-202ENST00000454608 ZBTB7AO95365 584 aa15.29■□□□□ 0.04
USP41-202ENST00000454608 C1QTNF8P60827 252 aa15.29■□□□□ 0.04
USP41-202ENST00000454608 SYT17Q9BSW7 474 aa15.29■□□□□ 0.04
USP41-202ENST00000454608 CDCA7Q9BWT1 371 aaPredicted RBP15.29■□□□□ 0.04
USP41-202ENST00000454608 AATKQ6ZMQ8 1374 aa15.28■□□□□ 0.04
USP41-202ENST00000454608 PDGFDQ9GZP0 370 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms