RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 ZNF211Q13398 564 aaPredicted RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 SMC5Q8IY18 1101 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 CCDC146Q8IYE0 955 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 SPDYE1Q8NFV5 336 aaPredicted RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 YTHDC1Q96MU7 727 aaKnown RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 CCDC61Q9Y6R9 512 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 CCDC180Q9P1Z9 1646 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 RSF1Q96T23 1441 aaPredicted RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 SH3BP5O60239 455 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 EVA1CP58658 441 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 PLEKHG6Q3KR16 790 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 RAVER1Q8IY67 606 aaKnown RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 METTL14Q9HCE5 456 aaKnown RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 SCRIBQ14160 1630 aa5.81□□□□□ -1.48
GTDC1-206ENST00000409214 SPDYE16A6NNV3 312 aaPredicted RBP5.81□□□□□ -1.48
GTDC1-206ENST00000409214 DNAJA1P31689 397 aaKnown RBP5.81□□□□□ -1.48
GTDC1-206ENST00000409214 C11orf96Q7Z7L8 435 aa5.81□□□□□ -1.48
GTDC1-206ENST00000409214 FAM69CQ0P6D2 419 aa5.81□□□□□ -1.48
GTDC1-206ENST00000409214 CBLBQ13191 982 aa5.81□□□□□ -1.48
GTDC1-206ENST00000409214 IRF2BPLQ9H1B7 796 aa5.81□□□□□ -1.48
GTDC1-206ENST00000409214 PCDHB15Q9Y5E8 787 aa5.81□□□□□ -1.48
GTDC1-206ENST00000409214 COL4A3BPQ9Y5P4 624 aa5.81□□□□□ -1.48
GTDC1-206ENST00000409214 TBX4P57082 545 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 MAMSTRQ6ZN01 415 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 CAPN10Q9HC96 672 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 NPDC1Q9NQX5 325 aaPredicted RBP5.8□□□□□ -1.48
GTDC1-206ENST00000409214 NOP58Q9Y2X3 529 aaKnown RBP5.8□□□□□ -1.48
GTDC1-206ENST00000409214 MTMR3Q13615 1198 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 LONRF3Q496Y0 759 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 CRTC2Q53ET0 693 aaPredicted RBP5.8□□□□□ -1.48
GTDC1-206ENST00000409214 PPP1R18Q6NYC8 613 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 ZNF710Q8N1W2 664 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 GPHNQ9NQX3 736 aaPredicted RBP5.8□□□□□ -1.48
GTDC1-206ENST00000409214 NOVA2Q9UNW9 492 aaKnown RBP5.8□□□□□ -1.48
GTDC1-206ENST00000409214 KAT6BQ8WYB5 2073 aa5.8□□□□□ -1.48
GTDC1-206ENST00000409214 MRPL58Q14197 206 aaKnown RBP5.79□□□□□ -1.48
GTDC1-206ENST00000409214 IFNL1Q8IU54 200 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 FMNL3Q8IVF7 1028 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 IFT57Q9NWB7 429 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 ABCC9O60706 1549 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 ARID4AP29374 1257 aaPredicted RBP5.79□□□□□ -1.48
GTDC1-206ENST00000409214 GRIPAP1Q4V328 841 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 PCDH12Q9NPG4 1184 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 HOXA2O43364 376 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 TSHZ1Q6ZSZ6 1077 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 DEPDC4Q8N2C3 294 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 CABLES1Q8TDN4 633 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 MAF1Q9H063 256 aa5.79□□□□□ -1.48
GTDC1-206ENST00000409214 CUEDC1Q9NWM3 386 aaPredicted RBP5.79□□□□□ -1.48
GTDC1-206ENST00000409214 CCDC189A1A4V9 331 aa5.78□□□□□ -1.48
GTDC1-206ENST00000409214 SOX12O15370 315 aa5.78□□□□□ -1.48
GTDC1-206ENST00000409214 RHBDL3P58872 404 aa5.78□□□□□ -1.48
GTDC1-206ENST00000409214 RIC3Q7Z5B4 369 aa5.78□□□□□ -1.48
GTDC1-206ENST00000409214 FILIP1Q7Z7B0 1213 aa5.78□□□□□ -1.48
GTDC1-206ENST00000409214 CCDC184Q52MB2 194 aa5.78□□□□□ -1.48
GTDC1-206ENST00000409214 CLEC4GQ6UXB4 293 aa5.78□□□□□ -1.48
GTDC1-206ENST00000409214 ABL1P00519 1130 aa5.77□□□□□ -1.49
GTDC1-206ENST00000409214 ATP2B1P20020 1258 aa5.77□□□□□ -1.49
GTDC1-206ENST00000409214 NEUROD1Q13562 356 aa5.77□□□□□ -1.49
GTDC1-206ENST00000409214 CCDC181Q5TID7 509 aa5.77□□□□□ -1.49
GTDC1-206ENST00000409214 TSR2Q969E8 191 aaKnown RBP5.77□□□□□ -1.49
GTDC1-206ENST00000409214 LGR5O75473 907 aa5.77□□□□□ -1.49
GTDC1-206ENST00000409214 NDUFV2P19404 249 aa5.77□□□□□ -1.49
GTDC1-206ENST00000409214 UPF1Q92900 1129 aaKnown RBP eCLIP5.77□□□□□ -1.49
GTDC1-206ENST00000409214 ANO8Q9HCE9 1232 aaPredicted RBP5.77□□□□□ -1.49
GTDC1-206ENST00000409214 H3BRB1 525 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 SECISBP2LQ93073 1101 aaKnown RBP5.76□□□□□ -1.49
GTDC1-206ENST00000409214 RPS6KC1Q96S38 1066 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 MTA3Q9BTC8 594 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 TUT1Q9H6E5 874 aaKnown RBP5.76□□□□□ -1.49
GTDC1-206ENST00000409214 GNL3LQ9NVN8 582 aaKnown RBP5.76□□□□□ -1.49
GTDC1-206ENST00000409214 CCER2I3L3R5 266 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 PRR29P0C7W0 189 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 ECM1Q16610 540 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 ZNF746Q6NUN9 644 aaPredicted RBP5.76□□□□□ -1.49
GTDC1-206ENST00000409214 NDUFB9Q9Y6M9 179 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 CECR2Q9BXF3 1484 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 SCAMP3O14828 347 aaKnown RBP5.76□□□□□ -1.49
GTDC1-206ENST00000409214 MAPK1P28482 360 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 DIEXFQ68CQ4 756 aaKnown RBP5.76□□□□□ -1.49
GTDC1-206ENST00000409214 SPIRE2Q8WWL2 714 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 JDP2Q8WYK2 163 aa5.76□□□□□ -1.49
GTDC1-206ENST00000409214 MOXD2PA6NHM9 499 aa5.75□□□□□ -1.49
GTDC1-206ENST00000409214 C4orf46Q504U0 113 aa5.75□□□□□ -1.49
GTDC1-206ENST00000409214 KRBA2Q6ZNG9 492 aa5.75□□□□□ -1.49
GTDC1-206ENST00000409214 METTL3Q86U44 580 aaKnown RBP5.75□□□□□ -1.49
GTDC1-206ENST00000409214 TMX4Q9H1E5 349 aaPredicted RBP5.75□□□□□ -1.49
GTDC1-206ENST00000409214 TTF2Q9UNY4 1162 aaKnown RBP5.75□□□□□ -1.49
GTDC1-206ENST00000409214 HSP90AB2PQ58FF8 381 aa5.75□□□□□ -1.49
GTDC1-206ENST00000409214 TMC2Q8TDI7 906 aa5.75□□□□□ -1.49
GTDC1-206ENST00000409214 UBA5Q9GZZ9 404 aa5.75□□□□□ -1.49
GTDC1-206ENST00000409214 WDHD1O75717 1129 aaPredicted RBP5.74□□□□□ -1.49
GTDC1-206ENST00000409214 FANCCQ00597 558 aa5.74□□□□□ -1.49
GTDC1-206ENST00000409214 AMPD3Q01432 767 aa5.74□□□□□ -1.49
GTDC1-206ENST00000409214 CTDSPL2Q05D32 466 aa5.74□□□□□ -1.49
GTDC1-206ENST00000409214 MAP9Q49MG5 647 aa5.74□□□□□ -1.49
GTDC1-206ENST00000409214 DDX56Q9NY93 547 aaKnown RBP5.74□□□□□ -1.49
GTDC1-206ENST00000409214 MAGEC2Q9UBF1 373 aaPredicted RBP5.74□□□□□ -1.49
GTDC1-206ENST00000409214 THRAP3Q9Y2W1 955 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms