RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.01
ZNF28-201ENST00000339844 DIP2AQ14689 1571 aa8.72□□□□□ -1.01
ZNF28-201ENST00000339844 NWD1Q149M9 1564 aa8.72□□□□□ -1.01
ZNF28-201ENST00000339844 POTEMA6NI47 508 aa8.71□□□□□ -1.02
ZNF28-201ENST00000339844 WDR70Q9NW82 654 aa8.71□□□□□ -1.02
ZNF28-201ENST00000339844 ALKQ9UM73 1620 aa8.71□□□□□ -1.02
ZNF28-201ENST00000339844 SETD1AO15047 1707 aaKnown RBP8.71□□□□□ -1.02
ZNF28-201ENST00000339844 PIK3C2GO75747 1445 aa8.71□□□□□ -1.02
ZNF28-201ENST00000339844 MYOM2P54296 1465 aa8.7□□□□□ -1.02
ZNF28-201ENST00000339844 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
ZNF28-201ENST00000339844 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
ZNF28-201ENST00000339844 DCAF11Q8TEB1 546 aa8.7□□□□□ -1.02
ZNF28-201ENST00000339844 AMOTL2Q9Y2J4 779 aa8.7□□□□□ -1.02
ZNF28-201ENST00000339844 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
ZNF28-201ENST00000339844 TMEM94Q12767 1356 aa8.7□□□□□ -1.02
ZNF28-201ENST00000339844 PIK3R4Q99570 1358 aa8.7□□□□□ -1.02
ZNF28-201ENST00000339844 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
ZNF28-201ENST00000339844 IQSEC2Q5JU85 1478 aa8.69□□□□□ -1.02
ZNF28-201ENST00000339844 ASXL1Q8IXJ9 1541 aa8.69□□□□□ -1.02
ZNF28-201ENST00000339844 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
ZNF28-201ENST00000339844 TMEM132EQ6IEE7 984 aa8.68□□□□□ -1.02
ZNF28-201ENST00000339844 ILDR1Q86SU0 546 aaPredicted RBP8.68□□□□□ -1.02
ZNF28-201ENST00000339844 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
ZNF28-201ENST00000339844 C14orf93Q9H972 538 aaKnown RBP8.68□□□□□ -1.02
ZNF28-201ENST00000339844 XRN1Q8IZH2 1706 aaKnown RBP8.68□□□□□ -1.02
ZNF28-201ENST00000339844 XIRP1Q702N8 1843 aaKnown RBP8.68□□□□□ -1.02
ZNF28-201ENST00000339844 G3V3G9 751 aa8.67□□□□□ -1.02
ZNF28-201ENST00000339844 ATMINO43313 823 aaPredicted RBP8.67□□□□□ -1.02
ZNF28-201ENST00000339844 PPP1R37O75864 691 aa8.67□□□□□ -1.02
ZNF28-201ENST00000339844 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
ZNF28-201ENST00000339844 FBXO41Q8TF61 875 aa8.67□□□□□ -1.02
ZNF28-201ENST00000339844 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
ZNF28-201ENST00000339844 ROBO2Q9HCK4 1378 aa8.66□□□□□ -1.02
ZNF28-201ENST00000339844 UBAP1LF5GYI3 381 aa8.66□□□□□ -1.02
ZNF28-201ENST00000339844 EIF4G2P78344 907 aaKnown RBP eCLIP8.66□□□□□ -1.02
ZNF28-201ENST00000339844 ASTLQ6HA08 431 aaPredicted RBP8.65□□□□□ -1.02
ZNF28-201ENST00000339844 POTEGQ6S5H5 508 aa8.65□□□□□ -1.02
ZNF28-201ENST00000339844 STK26Q9P289 416 aa8.65□□□□□ -1.02
ZNF28-201ENST00000339844 PTCH1Q13635 1447 aa8.64□□□□□ -1.03
ZNF28-201ENST00000339844 PRAG1Q86YV5 1406 aa8.64□□□□□ -1.03
ZNF28-201ENST00000339844 LRPPRCP42704 1394 aaKnown RBP8.64□□□□□ -1.03
ZNF28-201ENST00000339844 SEC24BO95487 1268 aa8.64□□□□□ -1.03
ZNF28-201ENST00000339844 PLCG2P16885 1265 aa8.64□□□□□ -1.03
ZNF28-201ENST00000339844 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
ZNF28-201ENST00000339844 RBM19Q9Y4C8 960 aaKnown RBP8.64□□□□□ -1.03
ZNF28-201ENST00000339844 ADGRB1O14514 1584 aa8.64□□□□□ -1.03
ZNF28-201ENST00000339844 TECPR2O15040 1411 aa8.63□□□□□ -1.03
ZNF28-201ENST00000339844 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
ZNF28-201ENST00000339844 ABCC11Q96J66 1382 aa8.63□□□□□ -1.03
ZNF28-201ENST00000339844 PLEKHH1Q9ULM0 1364 aa8.63□□□□□ -1.03
ZNF28-201ENST00000339844 IER5LQ5T953 404 aa8.63□□□□□ -1.03
ZNF28-201ENST00000339844 OTUD5Q96G74 571 aa8.63□□□□□ -1.03
ZNF28-201ENST00000339844 MS4A4AQ96JQ5 239 aa8.63□□□□□ -1.03
ZNF28-201ENST00000339844 NCOA3Q9Y6Q9 1424 aa8.63□□□□□ -1.03
ZNF28-201ENST00000339844 LAMC1P11047 1609 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 FANCIQ9NVI1 1328 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 TOM1O60784 492 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 PIP4K2BP78356 416 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 NBPF8Q3BBV2 869 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 WAPLQ7Z5K2 1190 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 OCEL1Q9H607 264 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
ZNF28-201ENST00000339844 MSH6P52701 1360 aa8.61□□□□□ -1.03
ZNF28-201ENST00000339844 HSPA5P11021 654 aaKnown RBP8.61□□□□□ -1.03
ZNF28-201ENST00000339844 NBR1Q14596 966 aa8.61□□□□□ -1.03
ZNF28-201ENST00000339844 CADPS2Q86UW7 1296 aa8.61□□□□□ -1.03
ZNF28-201ENST00000339844 C19orf44Q9H6X5 657 aa8.61□□□□□ -1.03
ZNF28-201ENST00000339844 PPP4R2Q9NY27 417 aa8.61□□□□□ -1.03
ZNF28-201ENST00000339844 ADGRL3Q9HAR2 1447 aa8.61□□□□□ -1.03
ZNF28-201ENST00000339844 KNDC1Q76NI1 1749 aa8.6□□□□□ -1.03
ZNF28-201ENST00000339844 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.6□□□□□ -1.03
ZNF28-201ENST00000339844 TRAK1Q9UPV9 953 aa8.6□□□□□ -1.03
ZNF28-201ENST00000339844 NALCNQ8IZF0 1738 aa8.6□□□□□ -1.03
ZNF28-201ENST00000339844 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
ZNF28-201ENST00000339844 SIRT1Q96EB6 747 aa8.59□□□□□ -1.03
ZNF28-201ENST00000339844 PRAM1Q96QH2 718 aa8.59□□□□□ -1.03
ZNF28-201ENST00000339844 FAM135BQ49AJ0 1406 aa8.59□□□□□ -1.03
ZNF28-201ENST00000339844 DLC1Q96QB1 1528 aa8.59□□□□□ -1.03
ZNF28-201ENST00000339844 WASHC2AQ641Q2 1341 aa8.58□□□□□ -1.04
ZNF28-201ENST00000339844 KIAA1210Q9ULL0 1709 aa8.58□□□□□ -1.04
ZNF28-201ENST00000339844 DCCP43146 1447 aa8.58□□□□□ -1.04
ZNF28-201ENST00000339844 MST1RQ04912 1400 aa8.58□□□□□ -1.04
ZNF28-201ENST00000339844 ATF3P18847 181 aa8.58□□□□□ -1.04
ZNF28-201ENST00000339844 PDE4AP27815 886 aa8.58□□□□□ -1.04
ZNF28-201ENST00000339844 SAFB2Q14151 953 aaKnown RBP eCLIP8.58□□□□□ -1.04
ZNF28-201ENST00000339844 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
ZNF28-201ENST00000339844 HSPA1LP34931 641 aa8.57□□□□□ -1.04
ZNF28-201ENST00000339844 HNRNPUQ00839 825 aaKnown RBP eCLIP8.57□□□□□ -1.04
ZNF28-201ENST00000339844 PRKRIP1Q9H875 184 aaPredicted RBP8.57□□□□□ -1.04
ZNF28-201ENST00000339844 TRPM1Q7Z4N2 1603 aa8.57□□□□□ -1.04
ZNF28-201ENST00000339844 CCDC7Q96M83 1385 aa8.57□□□□□ -1.04
ZNF28-201ENST00000339844 ZBED9Q6R2W3 1325 aa8.56□□□□□ -1.04
ZNF28-201ENST00000339844 IRX5P78411 483 aaPredicted RBP8.56□□□□□ -1.04
ZNF28-201ENST00000339844 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
ZNF28-201ENST00000339844 L3MBTL3Q96JM7 780 aaPredicted RBP8.56□□□□□ -1.04
ZNF28-201ENST00000339844 LARP6Q9BRS8 491 aaKnown RBP8.56□□□□□ -1.04
ZNF28-201ENST00000339844 HIRIP3Q9BW71 556 aaPredicted RBP8.56□□□□□ -1.04
ZNF28-201ENST00000339844 POGKQ9P215 609 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms