RNA–Protein interactions for RNA: ENSMUST00000179226.7

Col4a3bp-203, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 3,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-203ENSMUST00000179226 Tmx3Q8BXZ1 456 aa20.25■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Tsen2Q6P7W5 460 aa20.25■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Pdcd11Q6NS46 1862 aaKnown RBP20.25■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 KnstrnQ9D9Z1 312 aaKnown RBP20.24■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Kidins220E9Q9B7 1793 aa20.24■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Ccdc60Q8C4J0 545 aa20.24■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Mknk2Q8CDB0 459 aa20.24■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Zfyve16Q80U44 1528 aa20.23■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Brd1E9PZ26 1189 aaKnown RBP20.23■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Bag4Q8CI61 457 aa20.22■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Nom1Q3UFM5 854 aaKnown RBP20.21■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 AnkarA2RT91 1465 aa20.21■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Pank2Q3U4S0 443 aa20.21■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Gprasp1Q5U4C1 1347 aa20.21■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Robo2Q7TPD3 1470 aa20.21■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Cul9Q80TT8 1865 aa20.21■□□□□ 0.83
Col4a3bp-203ENSMUST00000179226 Cald1E9QA15 768 aaKnown RBP20.2■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Tbc1d9Q3UYK3 1264 aa20.2■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Senp3Q9EP97 568 aaKnown RBP20.2■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Scaf11E9PZM7 1456 aaKnown RBP20.2■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Nsd2Q8BVE8 1365 aa20.19■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Ush1cQ9ES64 910 aa20.19■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Nek4Q9Z1J2 792 aa20.19■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Gse1Q3U3C9 1213 aa20.18■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Hs1bp3Q3TC93 395 aa20.18■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Tmco5bQ80X59 307 aa20.17■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Rasa1E9PYG6 1038 aa20.17■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Ccdc146E9Q9F7 977 aa20.17■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 CastP51125 788 aa20.17■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Kif1bQ60575 1816 aaKnown RBP20.17■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Casq1O09165 405 aa20.16■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Dhx30Q99PU8 1217 aaKnown RBP20.16■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Stard8Q8K031 1019 aa20.16■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Usp54Q8BL06 1588 aaKnown RBP20.15■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Myo3aQ8K3H5 1613 aa20.15■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Abca9Q8K449 1623 aa20.15■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Gzf1Q4VBD9 706 aa20.15■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Ppp1r18Q8BQ30 594 aa20.15■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Cep152A2AUM9 1736 aaKnown RBP20.15■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Hecw1Q8K4P8 1604 aa20.14■□□□□ 0.82
Col4a3bp-203ENSMUST00000179226 Wdr63B2RY71 923 aa20.14■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Gys2Q8VCB3 704 aa20.13■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 ShprhQ7TPQ3 1674 aa20.13■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Uggt2E9Q4X2 1504 aa20.13■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 KdrP35918 1367 aa20.13■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Kdm4cQ8VCD7 1054 aa20.13■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Vgll3P85442 326 aa20.12■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Q4VA45 678 aa20.12■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Ncapd2Q8K2Z4 1392 aa20.12■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Becn1O88597 448 aa20.12■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 G3bp1P97855 465 aaKnown RBP20.12■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Rbm27Q5SFM8 1060 aaKnown RBP20.12■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Fez1Q8K0X8 392 aa20.11■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Nphp4P59240 1425 aa20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Gm9992B2RWK3 458 aa20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Stag3O70576 1240 aa20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Puf60Q3UEB3 564 aaKnown RBP20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Unc93aQ710D3 458 aa20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Rnf214Q8BFU3 668 aaKnown RBP20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Pnma3Q8JZW8 466 aa20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Ptch1Q61115 1434 aa20.1■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Cfap65Q3V0B4 1847 aa20.09■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Talpid3E9PV87 1520 aa20.09■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 4931400O07RikQ9D4M5 137 aa20.09■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 ErbinQ80TH2 1402 aa20.09■□□□□ 0.81
Col4a3bp-203ENSMUST00000179226 Pdcl2Q78Y63 240 aa20.08■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 FanciQ8K368 1330 aa20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Syce3B5KM66 88 aa20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Ythdc1E9Q5K9 736 aaKnown RBP20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Xrn1P97789 1719 aaKnown RBP20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Neurl4Q5NCX5 1563 aa20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Adgrl3Q80TS3 1537 aa20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Ankrd50F7BE84 1390 aa20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Cdk5rap2Q8K389 1822 aa20.06■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Zranb1Q7M760 708 aa20.05■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 EngaseQ8BX80 734 aa20.05■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 OvosQ3UU35 1456 aa20.05■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Tnnt2P50752 301 aa20.04■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 1700010I14RikQ7TPG0 532 aa20.04■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Fbxo2Q80UW2 297 aa20.04■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Nos1Q9Z0J4 1429 aa20.04■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 ImpactO55091 318 aa20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 CarsQ9ER72 831 aaKnown RBP20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Lekr1B2RVN1 116 aa20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Zscan25B2RX31 543 aa20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Q3UPC7 1272 aa20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Zkscan1Q8BGS3 561 aaKnown RBP20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Depdc5P61460 1591 aa20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Ttc21bQ0HA38 1315 aa20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Ttc21aQ8C0S4 1314 aa20.03■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Cetn4Q8K4K1 168 aa20.02■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Gdpd2Q9ESM6 539 aa20.02■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Ttc37F8VPK0 1563 aa20.02■□□□□ 0.8
Col4a3bp-203ENSMUST00000179226 Chmp4cQ9D7F7 232 aa20.01■□□□□ 0.79
Col4a3bp-203ENSMUST00000179226 Rcan3Q9JKK0 239 aa20.01■□□□□ 0.79
Col4a3bp-203ENSMUST00000179226 LifrP42703 1092 aa20.01■□□□□ 0.79
Col4a3bp-203ENSMUST00000179226 Gadd45bP22339 160 aa20■□□□□ 0.79
Col4a3bp-203ENSMUST00000179226 Lmod3E9QA62 571 aa20■□□□□ 0.79
Col4a3bp-203ENSMUST00000179226 Plekhm2Q80TQ5 1018 aa20■□□□□ 0.79
Col4a3bp-203ENSMUST00000179226 CatipB9EKE5 520 aa20■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms