RNA–Protein interactions for RNA: ENSMUST00000170957.2

Ggps1-201, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ggps1, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-201ENSMUST00000170957 Cdc42bpbQ7TT50 1713 aa11.89□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Aplp1Q03157 653 aa11.89□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Ythdc1E9Q5K9 736 aaKnown RBP11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Ric3Q8BPM6 367 aa11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Trim58Q5NCC9 485 aa11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Dzip1Q8BMD2 852 aa11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 EspnQ9ET47 871 aa11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Triml2E9PW10 424 aa11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Sf3b2Q3UJB0 878 aaKnown RBP11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Nphp4P59240 1425 aa11.88□□□□□ -0.51
Ggps1-201ENSMUST00000170957 AampJ3QN89 436 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Eif4g2Q62448 906 aaKnown RBP11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Tulp4Q9JIL5 1547 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Speer4bQ9D9F7 267 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Gm21680A0A0G2JGR8 267 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Sbno1Q689Z5 1390 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Ccdc146E9Q9F7 977 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Ppp1r15aP17564 657 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Slc4a10Q5DTL9 1118 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Klhdc4Q921I2 584 aa11.87□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Myo3aQ8K3H5 1613 aa11.86□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Amotl2Q8K371 772 aa11.86□□□□□ -0.51
Ggps1-201ENSMUST00000170957 TimelessQ9R1X4 1197 aa11.86□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Abca6Q8K441 1624 aa11.86□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Kidins220E9Q9B7 1793 aa11.86□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Dnajc10Q9DC23 793 aa11.86□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Nckap5lQ6GQX2 1323 aa11.85□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Gimap5Q8BWF2 308 aa11.85□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Kcnh5Q920E3 988 aa11.85□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Map4k4P97820 1233 aaKnown RBP11.85□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Gas2l2Q5SSG4 860 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Cdc37l1Q9CZP7 335 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Ccdc171E9Q1U1 1324 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Vsig10D3YX43 558 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Hsp90b1P08113 802 aaKnown RBP11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Cul7Q8VE73 1689 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Ppm1gQ61074 542 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 TkfcQ8VC30 578 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Chmp3Q9CQ10 224 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Trpm2Q91YD4 1506 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Tspyl2Q7TQI8 677 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Ccdc155Q80VJ8 648 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Sv2bQ8BG39 683 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Slc35g1Q8BY79 368 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Rapgef3Q8VCC8 918 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 PzpQ61838 1495 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 Robo2Q7TPD3 1470 aa11.84□□□□□ -0.51
Ggps1-201ENSMUST00000170957 AnkarA2RT91 1465 aa11.83□□□□□ -0.52
Ggps1-201ENSMUST00000170957 GorabQ8BRM2 368 aa11.83□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Hoxb7P09024 217 aa11.83□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Eif4a2P10630 407 aa11.83□□□□□ -0.52
Ggps1-201ENSMUST00000170957 ZgpatQ8VDM1 511 aa11.83□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Gm21663A0A0G2JE01 267 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Gm7361D3Z6R1 267 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 5031410I06RikE9Q4E0 267 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Gm1979E9QAN3 267 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Gm5862K7N5V5 267 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Gm10220K7N660 267 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Cnnm1Q0GA42 951 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Ercc6l2Q9JIM3 1537 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Cfdp1O88271 295 aaKnown RBP11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Abca9Q8K449 1623 aa11.82□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Nol10Q5RJG1 687 aaKnown RBP11.81□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Clasp1Q80TV8 1535 aaKnown RBP11.81□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Snap23O09044 210 aa11.81□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Uspl1Q3ULM6 1089 aa11.81□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Pde3bQ61409 1100 aa11.81□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Mfap1aC0HKD8 439 aaKnown RBP11.8□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Mfap1bC0HKD9 439 aaKnown RBP11.8□□□□□ -0.52
Ggps1-201ENSMUST00000170957 ShprhQ7TPQ3 1674 aa11.8□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Zmym4A2A791 1549 aaKnown RBP11.8□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Plekhd1B2RPU2 505 aa11.79□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Rsph6aQ8CDR2 708 aa11.79□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Nlgn1Q99K10 843 aa11.79□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Txnrd1Q9JMH6 613 aa11.79□□□□□ -0.52
Ggps1-201ENSMUST00000170957 AglF8VPN4 1532 aa11.79□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Pola1P33609 1465 aa11.79□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Map3k13Q1HKZ5 959 aa11.79□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Sugp2Q8CH09 1067 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Gm16486A0A1D5RMD1 1434 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 BcanQ61361 883 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Cgnl1Q6AW69 1298 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Prim1P20664 417 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Eya1P97767 591 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Mphosph10Q810V0 681 aaKnown RBP11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Clstn1Q9EPL2 979 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Atf7ipQ7TT18 1306 aa11.78□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Knl1Q66JQ7 1612 aa11.77□□□□□ -0.52
Ggps1-201ENSMUST00000170957 Setbp1Q9Z180 1582 aa11.77□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Btbd11Q6GQW0 1109 aa11.77□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Dmrt2Q8BG36 561 aa11.77□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Nol11Q8BJW5 723 aaKnown RBP11.77□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Chrna2Q91X60 512 aa11.77□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Prkrip1Q9CWV6 186 aaKnown RBP11.77□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Brpf1B2RRD7 1212 aa11.76□□□□□ -0.53
Ggps1-201ENSMUST00000170957 AppP12023 770 aa11.76□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Smg7Q5RJH6 1138 aaKnown RBP11.76□□□□□ -0.53
Ggps1-201ENSMUST00000170957 RereQ80TZ9 1558 aa11.76□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Exoc6bA6H5Z3 810 aa11.76□□□□□ -0.53
Ggps1-201ENSMUST00000170957 Tom1O88746 492 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms