RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Trim44Q9QXA7 346 aa14.32□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Puf60Q3UEB3 564 aaKnown RBP14.32□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Clcn1Q64347 994 aa14.32□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Kiaa1210E9Q0C6 1637 aa14.32□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 IbtkQ6ZPR6 1352 aaKnown RBP14.31□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Cald1E9QA15 768 aaKnown RBP14.31□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Kdm5aQ3UXZ9 1690 aa14.31□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Pola1P33609 1465 aa14.31□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Gm32742A0A1B0GT42 1604 aa14.31□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Lekr1B2RVN1 116 aa14.31□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Q4VA45 678 aa14.31□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Fam135bQ9DAI6 1403 aa14.3□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Nsd2Q8BVE8 1365 aa14.3□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Prdm16A2A935 1275 aa14.29□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Myom2Q14BI5 1463 aa14.29□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Safb2Q80YR5 991 aaKnown RBP14.29□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Map7O88735 730 aa14.28□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 Pdia4P08003 638 aaKnown RBP14.28□□□□□ -0.12
Prpf40b-208ENSMUST00000136980 ErbinQ80TH2 1402 aa14.27□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Cdc42bpbQ7TT50 1713 aa14.27□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Usp54Q8BL06 1588 aaKnown RBP14.26□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 SkilQ60665 675 aa14.26□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Stk26Q99JT2 416 aa14.26□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Ttc21bQ0HA38 1315 aa14.26□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Myo3aQ8K3H5 1613 aa14.25□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Scaf11E9PZM7 1456 aaKnown RBP14.25□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Robo2Q7TPD3 1470 aa14.25□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 CastP51125 788 aa14.25□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Rbm25B2RY56 838 aaKnown RBP14.24□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Rsph3aQ3UFY4 516 aa14.24□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Erich6bQ9D4S6 220 aa14.24□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Nek4Q9Z1J2 792 aa14.24□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Abca8bQ8K440 1620 aa14.24□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Gprasp1Q5U4C1 1347 aa14.24□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Ccdc146E9Q9F7 977 aa14.23□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Ripk4Q9ERK0 786 aa14.23□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Itsn2Q9Z0R6 1659 aa14.23□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Brd1E9PZ26 1189 aaKnown RBP14.23□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 G3bp1P97855 465 aaKnown RBP14.23□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Iqsec2Q5DU25 1478 aa14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Znf608Q56A10 1511 aa14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Ddrgk1Q80WW9 315 aa14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Ppp1r18Q8BQ30 594 aa14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Gys2Q8VCB3 704 aa14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Exosc9Q9JHI7 438 aaKnown RBP14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 ShprhQ7TPQ3 1674 aa14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Kif1bQ60575 1816 aaKnown RBP14.22□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Igf1rQ60751 1373 aa14.21□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Dhx16G3X8X0 1044 aaKnown RBP14.21□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Tbc1d9Q3UYK3 1264 aa14.21□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Bloc1s4Q8VED2 215 aa14.21□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 KnstrnQ9D9Z1 312 aaKnown RBP14.21□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 AatkQ80YE4 1365 aa14.21□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Myom1Q62234 1667 aaKnown RBP14.21□□□□□ -0.13
Prpf40b-208ENSMUST00000136980 Stac3Q8BZ71 360 aa14.2□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Pdcd11Q6NS46 1862 aaKnown RBP14.2□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Gm10093D3YYI8 482 aa14.2□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Hdac1O09106 482 aaKnown RBP14.2□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Atp1b4Q99ME6 356 aa14.2□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Rnf17Q99MV7 1640 aa14.2□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Gm156Q58A37 223 aa14.2□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Adgrl3Q80TS3 1537 aa14.19□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Ppp6r1Q7TSI3 856 aa14.19□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Chmp4cQ9D7F7 232 aa14.19□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Erbb4Q61527 1308 aa14.19□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Nphp4P59240 1425 aa14.19□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Sparcl1P70663 650 aa14.19□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Atp10dQ8K2X1 1416 aa14.18□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Plin1Q8CGN5 517 aa14.18□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Arid3cA6PWV5 409 aa14.18□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 AnkarA2RT91 1465 aa14.17□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Wdr63B2RY71 923 aa14.17□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 PtmaP26350 111 aa14.17□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Q3UPC7 1272 aa14.17□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Cfap65Q3V0B4 1847 aa14.17□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Tmed8Q3UHI4 326 aa14.17□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Cfap74Q3UY96 1578 aa14.16□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Zhx1P70121 873 aa14.16□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Cers3Q1A3B0 383 aa14.16□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Uggt2E9Q4X2 1504 aa14.16□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Bag4Q8CI61 457 aa14.16□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 IqubQ8CDK3 788 aa14.15□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Plekhm2Q80TQ5 1018 aa14.15□□□□□ -0.14
Prpf40b-208ENSMUST00000136980 Rasa1E9PYG6 1038 aa14.15□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Tmx3Q8BXZ1 456 aa14.15□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 AU022751B1B0V2 589 aa14.14□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Chrm1P12657 460 aa14.14□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Ankrd50F7BE84 1390 aa14.14□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Abcc3B2RX12 1523 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Cavin4A2AMM0 362 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Pank2Q3U4S0 443 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 KdrP35918 1367 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Kcng1A2BDX4 514 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 VgfQ0VGU4 617 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 MpndQ3TV65 487 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Talpid3E9PV87 1520 aa14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Cep152A2AUM9 1736 aaKnown RBP14.13□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Casq1O09165 405 aa14.12□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 U2surpQ6NV83 1029 aaKnown RBP14.12□□□□□ -0.15
Prpf40b-208ENSMUST00000136980 Slc12a5Q91V14 1138 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms