RNA–Protein interactions for RNA: ENSMUST00000125541.1

Trnp1-202, Transcript of TMF-regulated nuclear protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trnp1, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1-202ENSMUST00000125541 NgefQ8CHT1 710 aa41.23■■■■■ 4.19
Trnp1-202ENSMUST00000125541 Slain2Q8CI08 581 aa41.22■■■■■ 4.19
Trnp1-202ENSMUST00000125541 Tmem2Q5FWI3 1383 aa41.21■■■■■ 4.19
Trnp1-202ENSMUST00000125541 CemipQ8BI06 1361 aa41.21■■■■■ 4.19
Trnp1-202ENSMUST00000125541 Sox12Q04890 314 aa41.2■■■■■ 4.19
Trnp1-202ENSMUST00000125541 Scaf1Q5U4C3 1256 aaKnown RBP41.19■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Trim28Q62318 834 aa41.19■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Map4k4P97820 1233 aaKnown RBP41.18■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Mdc1Q5PSV9 1707 aa41.18■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Amigo3Q8C2S7 508 aa41.16■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Pik3c2aQ61194 1686 aa41.15■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Col16a1Q8BLX7 1580 aa41.15■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Golga2Q921M4 999 aa41.15■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Cdk12Q14AX6 1484 aaKnown RBP41.14■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Camta1A2A891 1682 aa41.13■■■■■ 4.18
Trnp1-202ENSMUST00000125541 Tsen2Q6P7W5 460 aa41.1■■■■■ 4.17
Trnp1-202ENSMUST00000125541 Wnk3Q80XP9 1757 aa41.09■■■■■ 4.17
Trnp1-202ENSMUST00000125541 Fam135bQ9DAI6 1403 aa41.08■■■■■ 4.17
Trnp1-202ENSMUST00000125541 Ppp1r15aP17564 657 aa41.08■■■■■ 4.17
Trnp1-202ENSMUST00000125541 Usp19Q3UJD6 1360 aa41.08■■■■■ 4.17
Trnp1-202ENSMUST00000125541 Birc3O08863 600 aa41.07■■■■■ 4.17
Trnp1-202ENSMUST00000125541 Zfp444Q3TDV8 331 aaKnown RBP41.06■■■■■ 4.16
Trnp1-202ENSMUST00000125541 Fbxo41Q6NS60 873 aa41.05■■■■■ 4.16
Trnp1-202ENSMUST00000125541 Frmpd2A0A140LI67 1392 aa41.04■■■■■ 4.16
Trnp1-202ENSMUST00000125541 Hspa1lP16627 641 aa41.04■■■■■ 4.16
Trnp1-202ENSMUST00000125541 Evi5lH3BKQ3 813 aa41.03■■■■■ 4.16
Trnp1-202ENSMUST00000125541 U2af1Q9D883 239 aaKnown RBP41.02■■■■■ 4.16
Trnp1-202ENSMUST00000125541 Ubr1O70481 1757 aa41.02■■■■■ 4.16
Trnp1-202ENSMUST00000125541 Uspl1Q3ULM6 1089 aa41.01■■■■■ 4.16
Trnp1-202ENSMUST00000125541 Ncbp3Q8BZR9 615 aaKnown RBP41■■■■■ 4.15
Trnp1-202ENSMUST00000125541 Kcna6Q61923 529 aa40.99■■■■■ 4.15
Trnp1-202ENSMUST00000125541 Scn7aB1AYL1 1681 aa40.98■■■■■ 4.15
Trnp1-202ENSMUST00000125541 Dennd6aQ8BH65 605 aa40.97■■■■■ 4.15
Trnp1-202ENSMUST00000125541 Znf541Q0GGX2 1363 aa40.96■■■■■ 4.15
Trnp1-202ENSMUST00000125541 Atf3Q60765 181 aa40.95■■■■■ 4.15
Trnp1-202ENSMUST00000125541 Rad17Q6NXW6 688 aa40.94■■■■■ 4.15
Trnp1-202ENSMUST00000125541 Wdr17E9Q271 1322 aa40.94■■■■■ 4.14
Trnp1-202ENSMUST00000125541 CrbnQ8C7D2 445 aa40.94■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Slc12a5Q91V14 1138 aa40.94■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Fchsd2Q3USJ8 740 aa40.92■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Nlgn1Q99K10 843 aa40.91■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Gimap6Q8K349 305 aa40.91■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Map2P20357 1828 aa40.91■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Rad21Q61550 635 aaKnown RBP40.89■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Ralbp1Q62172 648 aa40.89■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Ciz1Q8VEH2 845 aa40.88■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Bcl11bQ99PV8 884 aa40.88■■■■■ 4.14
Trnp1-202ENSMUST00000125541 Brinp3Q499E0 766 aa40.88■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Ncoa4Q5U4H9 625 aa40.88■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Farp2Q91VS8 1065 aa40.88■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Zfp777B9EKF4 885 aa40.86■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Fyb1O35601 819 aa40.86■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Uhrf1bp1lA2RSJ4 1457 aa40.85■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Ano8Q6PB70 1060 aa40.85■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Slc35g1Q8BY79 368 aa40.85■■■■■ 4.13
Trnp1-202ENSMUST00000125541 TimelessQ9R1X4 1197 aa40.85■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Gm21190A0A0G2JGJ6 266 aa40.85■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Eif5bQ05D44 1216 aaKnown RBP40.85■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Upf2A2AT37 1269 aaKnown RBP40.84■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Speer4f1Q9D5Q6 258 aa40.84■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Ncapd2Q8K2Z4 1392 aa40.83■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Rsph6aQ8CDR2 708 aa40.83■■■■■ 4.13
Trnp1-202ENSMUST00000125541 Kank1E9Q238 1360 aa40.8■■■■■ 4.12
Trnp1-202ENSMUST00000125541 Spef2Q8C9J3 1734 aa40.8■■■■■ 4.12
Trnp1-202ENSMUST00000125541 Cabp4Q8VHC5 271 aa40.79■■■■■ 4.12
Trnp1-202ENSMUST00000125541 Mapk8ip3Q9ESN9 1337 aa40.78■■■■■ 4.12
Trnp1-202ENSMUST00000125541 PalmQ9Z0P4 383 aa40.78■■■■■ 4.12
Trnp1-202ENSMUST00000125541 DccP70211 1447 aa40.78■■■■■ 4.12
Trnp1-202ENSMUST00000125541 Ttc41Q692V3 1318 aa40.75■■■■■ 4.11
Trnp1-202ENSMUST00000125541 FancaQ9JL70 1439 aa40.75■■■■■ 4.11
Trnp1-202ENSMUST00000125541 Apaf1O88879 1249 aa40.74■■■■■ 4.11
Trnp1-202ENSMUST00000125541 Ccdc30Q8BVF4 654 aa40.71■■■■■ 4.11
Trnp1-202ENSMUST00000125541 Cavin4A2AMM0 362 aa40.7■■■■■ 4.11
Trnp1-202ENSMUST00000125541 Eif4a2P10630 407 aa40.7■■■■■ 4.11
Trnp1-202ENSMUST00000125541 L3mbtl2P59178 703 aa40.7■■■■■ 4.11
Trnp1-202ENSMUST00000125541 Uhrf1bp1B2KF50 1429 aa40.69■■■■■ 4.1
Trnp1-202ENSMUST00000125541 Kcnh5Q920E3 988 aa40.69■■■■■ 4.1
Trnp1-202ENSMUST00000125541 Ecm2Q5FW85 670 aa40.69■■■■■ 4.1
Trnp1-202ENSMUST00000125541 PaskQ8CEE6 1383 aa40.68■■■■■ 4.1
Trnp1-202ENSMUST00000125541 Tcerg1Q8CGF7 1100 aaKnown RBP40.67■■■■■ 4.1
Trnp1-202ENSMUST00000125541 PtprvP70289 1705 aa40.66■■■■■ 4.1
Trnp1-202ENSMUST00000125541 Nckap5lQ6GQX2 1323 aa40.65■■■■■ 4.1
Trnp1-202ENSMUST00000125541 GnpatP98192 678 aa40.65■■■■■ 4.1
Trnp1-202ENSMUST00000125541 Nfat5Q9WV30 1534 aa40.64■■■■■ 4.1
Trnp1-202ENSMUST00000125541 Q4VA45 678 aa40.64■■■■■ 4.1
Trnp1-202ENSMUST00000125541 Siglec1Q62230 1695 aa40.62■■■■■ 4.09
Trnp1-202ENSMUST00000125541 Robo1O89026 1612 aa40.62■■■■■ 4.09
Trnp1-202ENSMUST00000125541 Neurod2Q62414 383 aa40.62■■■■■ 4.09
Trnp1-202ENSMUST00000125541 Plekhh1Q80TI1 1356 aa40.6■■■■■ 4.09
Trnp1-202ENSMUST00000125541 Dusp27Q148W8 1138 aa40.59■■■■■ 4.09
Trnp1-202ENSMUST00000125541 Hoxc9P09633 260 aa40.57■■■■■ 4.09
Trnp1-202ENSMUST00000125541 Iqcf3Q9D498 203 aa40.56■■■■■ 4.08
Trnp1-202ENSMUST00000125541 Erbb3Q61526 1339 aa40.55■■■■■ 4.08
Trnp1-202ENSMUST00000125541 Gimap5Q8BWF2 308 aa40.55■■■■■ 4.08
Trnp1-202ENSMUST00000125541 Ptpn23Q6PB44 1692 aa40.54■■■■■ 4.08
Trnp1-202ENSMUST00000125541 Parp14Q2EMV9 1817 aa40.54■■■■■ 4.08
Trnp1-202ENSMUST00000125541 Zmym3Q9JLM4 1370 aa40.54■■■■■ 4.08
Trnp1-202ENSMUST00000125541 Swt1Q9DBQ9 907 aa40.53■■■■■ 4.08
Trnp1-202ENSMUST00000125541 TatQ8QZR1 454 aa40.53■■■■■ 4.08
Trnp1-202ENSMUST00000125541 Slit2Q9R1B9 1521 aa40.52■■■■■ 4.08
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms