RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Pibf1E9Q6K3 756 aa10.29□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Aldh1l1Q8R0Y6 902 aa10.29□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Dot1lQ6XZL8 1540 aa10.29□□□□□ -0.76
Bdnf-210ENSMUST00000111051 CastP51125 788 aa10.29□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Safb2Q80YR5 991 aaKnown RBP10.29□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Zkscan1Q8BGS3 561 aaKnown RBP10.29□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Edc4Q3UJB9 1406 aaKnown RBP10.29□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Eif4g3Q80XI3 1579 aaKnown RBP10.28□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Q9D2X8 372 aa10.28□□□□□ -0.76
Bdnf-210ENSMUST00000111051 MsnP26041 577 aaKnown RBP10.28□□□□□ -0.76
Bdnf-210ENSMUST00000111051 InsrP15208 1372 aa10.28□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Abca16E9PWJ7 1678 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Tpm2P58774 284 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Pcmtd1P59913 357 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Txndc2Q6P902 515 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Rab11fip3Q8CHD8 1047 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Cdc37l1Q9CZP7 335 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Q9D9H8 365 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 CarsQ9ER72 831 aaKnown RBP10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Pola1P33609 1465 aa10.27□□□□□ -0.76
Bdnf-210ENSMUST00000111051 Gripap1Q8VD04 806 aa10.27□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Mast1Q9R1L5 1570 aa10.27□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Paxip1Q6NZQ4 1056 aa10.27□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Gas2l2Q5SSG4 860 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Plekhm2Q80TQ5 1018 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Tfip11Q9ERA6 838 aaKnown RBP10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 PalmQ9Z0P4 383 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Rlbp1Q9Z275 317 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Trpm2Q91YD4 1506 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Kif4P33174 1231 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Nom1Q3UFM5 854 aaKnown RBP10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 AnkarA2RT91 1465 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Cdk19Q8BWD8 501 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Plch2A2AP18 1501 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Catsper2A2ARP9 588 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Ncbp3Q8BZR9 615 aaKnown RBP10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Cyp46a1Q9WVK8 500 aa10.26□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Znf326O88291 580 aa10.25□□□□□ -0.77
Bdnf-210ENSMUST00000111051 KinQ8K339 391 aa10.25□□□□□ -0.77
Bdnf-210ENSMUST00000111051 PaskQ8CEE6 1383 aa10.25□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Fam208aQ69ZR9 1610 aaKnown RBP10.25□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Nphp4P59240 1425 aa10.25□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Fez1Q8K0X8 392 aa10.25□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Usp19Q3UJD6 1360 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Sos1Q62245 1319 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Ppip5k2Q6ZQB6 1129 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Tarbp1E9Q368 1579 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Q3UPC7 1272 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Cdc42bpaQ3UU96 1719 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Gm10093D3YYI8 482 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Gm973E9Q295 1059 aa10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Hdac1O09106 482 aaKnown RBP10.24□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Tshz2Q68FE9 1030 aa10.23□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Zkscan2G3X952 960 aa10.23□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Cc2d1aQ8K1A6 943 aa10.23□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Rrbp1Q99PL5 1605 aaKnown RBP10.23□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Wdr63B2RY71 923 aa10.23□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Phactr2B1AVP0 632 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Brd1E9PZ26 1189 aaKnown RBP10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Cspp1B2RX88 1205 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Ankrd44B2RXR6 993 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Erc2Q6PH08 957 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Slc12a5Q91V14 1138 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Ccdc173A0JLY1 547 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Ppp1r15aP17564 657 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Tbc1d9Q3UYK3 1264 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Ppp1r18Q8BQ30 594 aa10.22□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Col17a1Q07563 1470 aa10.21□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Anapc15-psA0A140T8L6 141 aa10.21□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Stk11ipQ3TAA7 1072 aa10.21□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Fbxo2Q80UW2 297 aa10.21□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Sv2bQ8BG39 683 aa10.21□□□□□ -0.77
Bdnf-210ENSMUST00000111051 Tnnt1O88346 262 aa10.21□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Hoxa7P02830 229 aa10.21□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Setd1aE9PYH6 1716 aa10.21□□□□□ -0.78
Bdnf-210ENSMUST00000111051 AnlnQ8K298 1121 aaKnown RBP10.21□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Cabp2Q9JLK4 216 aa10.21□□□□□ -0.78
Bdnf-210ENSMUST00000111051 PogkQ80TC5 607 aa10.2□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Abcc2Q8VI47 1543 aa10.2□□□□□ -0.78
Bdnf-210ENSMUST00000111051 LifrP42703 1092 aa10.2□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Myom2Q14BI5 1463 aa10.2□□□□□ -0.78
Bdnf-210ENSMUST00000111051 NinlQ6ZQ12 1394 aa10.2□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Kiaa1107Q80TK0 1369 aa10.2□□□□□ -0.78
Bdnf-210ENSMUST00000111051 RdxP26043 583 aaKnown RBP10.2□□□□□ -0.78
Bdnf-210ENSMUST00000111051 AU019823E9PUQ3 292 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 ImpactO55091 318 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 MecomP14404 1042 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 CgnP59242 1191 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 OvosQ3UU35 1456 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Sf3a1Q8K4Z5 791 aaKnown RBP10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Dnajc5bQ9CQ94 199 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Brpf1B2RRD7 1212 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Hmox1P14901 289 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 AatkQ80YE4 1365 aa10.19□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Cabp4Q8VHC5 271 aa10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Rnf214Q8BFU3 668 aaKnown RBP10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 R3hcc1Q8BSI6 488 aa10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Bag4Q8CI61 457 aa10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Ankrd50F7BE84 1390 aa10.18□□□□□ -0.78
Bdnf-210ENSMUST00000111051 Gnai2P08752 355 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms