RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Rrp12Q6P5B0 1295 aaKnown RBP13.7□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Rabep1O35551 862 aa13.7□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Anapc15P60007 132 aa13.7□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Gsdma3Q5Y4Y6 464 aa13.7□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Pknox2Q8BG99 474 aa13.7□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Sbno1Q689Z5 1390 aa13.69□□□□□ -0.22
Col20a1-201ENSMUST00000108856 MsnP26041 577 aaKnown RBP13.69□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Taok2Q6ZQ29 1240 aa13.69□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Cald1E9QA15 768 aaKnown RBP13.69□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Atl3Q91YH5 541 aa13.69□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Rbm25B2RY56 838 aaKnown RBP13.68□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Usp16Q99LG0 825 aa13.68□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Gm21680A0A0G2JGR8 267 aa13.68□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Kif1bQ60575 1816 aaKnown RBP13.68□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Usp54Q8BL06 1588 aaKnown RBP13.68□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Atp6v1dP57746 247 aa13.68□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Dennd6aQ8BH65 605 aa13.67□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Chmp4cQ9D7F7 232 aa13.67□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Eva1cP58659 440 aa13.67□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Smg7Q5RJH6 1138 aaKnown RBP13.67□□□□□ -0.22
Col20a1-201ENSMUST00000108856 TkfcQ8VC30 578 aa13.67□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Casq1O09165 405 aa13.67□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Plekhd1B2RPU2 505 aa13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Smarce1O54941 411 aaKnown RBP13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Gpatch11Q3UFS4 262 aa13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Filip1lQ6P6L0 1131 aa13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Farp2Q91VS8 1065 aa13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Ddrgk1Q80WW9 315 aa13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Ric3Q8BPM6 367 aa13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Kcnn1Q9EQR3 537 aa13.66□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Q9D2X8 372 aa13.65□□□□□ -0.22
Col20a1-201ENSMUST00000108856 4933402E13RikQ9D4D2 429 aa13.65□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Speer4bQ9D9F7 267 aa13.65□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Gm973E9Q295 1059 aa13.65□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Tnpo1Q8BFY9 898 aaKnown RBP13.65□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Swt1Q9DBQ9 907 aa13.65□□□□□ -0.22
Col20a1-201ENSMUST00000108856 Znf518aB2RRF6 1478 aaKnown RBP13.64□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Atf7ipQ7TT18 1306 aa13.64□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Phactr2B1AVP0 632 aa13.64□□□□□ -0.23
Col20a1-201ENSMUST00000108856 St18Q80TY4 1045 aa13.64□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Gm32742A0A1B0GT42 1604 aa13.63□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Map4k4P97820 1233 aaKnown RBP13.63□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Stk11ipQ3TAA7 1072 aa13.63□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Nek4Q9Z1J2 792 aa13.63□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Tmem94Q7TSH8 1360 aa13.63□□□□□ -0.23
Col20a1-201ENSMUST00000108856 AatkQ80YE4 1365 aa13.63□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Gli2Q0VGT2 1544 aa13.63□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Gnai1B2RSH2 354 aa13.62□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Gnai3Q9DC51 354 aa13.62□□□□□ -0.23
Col20a1-201ENSMUST00000108856 VgfQ0VGU4 617 aa13.62□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Rbm5Q91YE7 815 aaKnown RBP13.62□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Liat1Q810M6 228 aa13.62□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Smc4Q8CG47 1286 aa13.62□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Kdm5cP41230 1554 aa13.62□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Ppp2r3aB2RXC8 1150 aa13.61□□□□□ -0.23
Col20a1-201ENSMUST00000108856 AampJ3QN89 436 aa13.61□□□□□ -0.23
Col20a1-201ENSMUST00000108856 R3hcc1Q8BSI6 488 aa13.61□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Dusp27Q148W8 1138 aa13.61□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Gm16486A0A1D5RMD1 1434 aa13.61□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Hecw1Q8K4P8 1604 aa13.61□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Abcc3B2RX12 1523 aa13.61□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Cavin4A2AMM0 362 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Plcd4Q8K3R3 807 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Cep170Q6A065 1588 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Becn1O88597 448 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Tnnt2P50752 301 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 HypkQ9CR41 129 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 NhsB1AV60 1647 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 SkilQ60665 675 aa13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Sf3a1Q8K4Z5 791 aaKnown RBP13.6□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Neurl4Q5NCX5 1563 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Pcdh10E9PXQ7 1057 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Atxn3Q9CVD2 355 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Erbb3Q61526 1339 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Tulp4Q9JIL5 1547 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Egfem1Q8C088 590 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Emilin2Q8K482 1074 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Nphp4P59240 1425 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Ptch1Q61115 1434 aa13.59□□□□□ -0.23
Col20a1-201ENSMUST00000108856 Bcl2l13P59017 434 aa13.58□□□□□ -0.23
Col20a1-201ENSMUST00000108856 InsrP15208 1372 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Uspl1Q3ULM6 1089 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Tex14Q7M6U3 1450 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Gm21663A0A0G2JE01 267 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Gm7361D3Z6R1 267 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 5031410I06RikE9Q4E0 267 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Gm1979E9QAN3 267 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Gm5862K7N5V5 267 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Gm10220K7N660 267 aa13.58□□□□□ -0.24
Col20a1-201ENSMUST00000108856 NpatQ8BMA5 1420 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Kiaa0754Q69ZZ9 979 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Cetn4Q8K4K1 168 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Klf15Q9EPW2 415 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Ush1cQ9ES64 910 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Gnl3lQ6PGG6 577 aaKnown RBP13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Tspyl2Q7TQI8 677 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 Nol12Q8BG17 217 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 4930572O03RikQ8C5Y0 211 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 AnkarA2RT91 1465 aa13.57□□□□□ -0.24
Col20a1-201ENSMUST00000108856 RdxP26043 583 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms