RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Cacna2d3Q9Z1L5 1091 aa18.6■□□□□ 0.57
Shank1-203ENSMUST00000107938 1700019A02RikA0A087WPV9 146 aa18.6■□□□□ 0.57
Shank1-203ENSMUST00000107938 Sh2d4bA6X942 431 aa18.6■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ppp4r3bQ922R5 820 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Vps53Q8CCB4 832 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Tnip1Q9WUU8 647 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Elp1Q7TT37 1333 aaKnown RBP18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Swap70Q6A028 585 aaKnown RBP18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 FanciQ8K368 1330 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Golga4Q91VW5 2238 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Apol7aB2RT54 418 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Hvcn1Q3U2S8 269 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Hspa4Q61316 841 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 B4galnt4Q766D5 1034 aa18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Cbx1P83917 185 aaKnown RBP18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Mphosph10Q810V0 681 aaKnown RBP18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Rnf214Q8BFU3 668 aaKnown RBP18.59■□□□□ 0.57
Shank1-203ENSMUST00000107938 Letm1Q9Z2I0 738 aa18.58■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ctage5Q8R311 779 aa18.58■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ccdc183A2AJB1 534 aa18.58■□□□□ 0.57
Shank1-203ENSMUST00000107938 Stmn1P54227 149 aaKnown RBP18.58■□□□□ 0.57
Shank1-203ENSMUST00000107938 Pole3Q9JKP7 145 aa18.58■□□□□ 0.57
Shank1-203ENSMUST00000107938 Baz1aO88379 1555 aa18.58■□□□□ 0.57
Shank1-203ENSMUST00000107938 Triml2E9PW10 424 aa18.58■□□□□ 0.56
Shank1-203ENSMUST00000107938 Mipol1Q9D9F8 279 aa18.58■□□□□ 0.56
Shank1-203ENSMUST00000107938 Smco2Q9DA21 347 aa18.58■□□□□ 0.56
Shank1-203ENSMUST00000107938 Ccdc73Q8CDM4 1066 aa18.58■□□□□ 0.56
Shank1-203ENSMUST00000107938 Trim58Q5NCC9 485 aa18.57■□□□□ 0.56
Shank1-203ENSMUST00000107938 Naa15Q80UM3 865 aaKnown RBP18.57■□□□□ 0.56
Shank1-203ENSMUST00000107938 Luzp1Q8R4U7 1068 aaKnown RBP18.57■□□□□ 0.56
Shank1-203ENSMUST00000107938 Pafah1b1P63005 410 aaKnown RBP18.57■□□□□ 0.56
Shank1-203ENSMUST00000107938 TnmdQ9EP64 317 aa18.57■□□□□ 0.56
Shank1-203ENSMUST00000107938 CenphQ9QYM8 241 aa18.57■□□□□ 0.56
Shank1-203ENSMUST00000107938 Mical1Q8VDP3 1048 aa18.56■□□□□ 0.56
Shank1-203ENSMUST00000107938 Exoc6Q8R313 802 aa18.56■□□□□ 0.56
Shank1-203ENSMUST00000107938 Slu7Q8BHJ9 585 aa18.56■□□□□ 0.56
Shank1-203ENSMUST00000107938 Dpf1Q9QX66 387 aa18.56■□□□□ 0.56
Shank1-203ENSMUST00000107938 RpgrQ9R0X5 1001 aa18.56■□□□□ 0.56
Shank1-203ENSMUST00000107938 Erc2Q6PH08 957 aa18.56■□□□□ 0.56
Shank1-203ENSMUST00000107938 ErmnQ5EBJ4 281 aa18.55■□□□□ 0.56
Shank1-203ENSMUST00000107938 Zfp853A0A1D5RM95 733 aa18.55■□□□□ 0.56
Shank1-203ENSMUST00000107938 Tmco5bQ80X59 307 aa18.55■□□□□ 0.56
Shank1-203ENSMUST00000107938 March6Q6ZQ89 909 aa18.55■□□□□ 0.56
Shank1-203ENSMUST00000107938 DonsonQ9QXP4 560 aa18.54■□□□□ 0.56
Shank1-203ENSMUST00000107938 Abcf1Q6P542 837 aaKnown RBP18.53■□□□□ 0.56
Shank1-203ENSMUST00000107938 AdnpQ9Z103 1108 aaKnown RBP18.53■□□□□ 0.56
Shank1-203ENSMUST00000107938 Smc4Q8CG47 1286 aa18.53■□□□□ 0.56
Shank1-203ENSMUST00000107938 Hnrnpul1Q8VDM6 859 aaKnown RBP18.53■□□□□ 0.56
Shank1-203ENSMUST00000107938 MycbpQ9EQS3 103 aa18.53■□□□□ 0.56
Shank1-203ENSMUST00000107938 ImpactO55091 318 aa18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 Cep120Q7TSG1 988 aa18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 Nucb2P81117 420 aa18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 TchpQ3TVW5 497 aa18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 Luc7l3Q5SUF2 432 aaKnown RBP18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 Spats2Q8K1N4 545 aaKnown RBP18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 Naa25Q8BWZ3 972 aa18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 Ccdc158Q8CDI6 1109 aa18.52■□□□□ 0.56
Shank1-203ENSMUST00000107938 Samd1D3YXK1 519 aa18.51■□□□□ 0.55
Shank1-203ENSMUST00000107938 Stag3O70576 1240 aa18.51■□□□□ 0.55
Shank1-203ENSMUST00000107938 Abcd1P48410 736 aa18.51■□□□□ 0.55
Shank1-203ENSMUST00000107938 Lrrfip1Q3UZ39 729 aaKnown RBP18.51■□□□□ 0.55
Shank1-203ENSMUST00000107938 MvpQ9EQK5 861 aa18.51■□□□□ 0.55
Shank1-203ENSMUST00000107938 Ccdc174Q3U155 467 aa18.51■□□□□ 0.55
Shank1-203ENSMUST00000107938 Cfap45Q9D9U9 551 aa18.51■□□□□ 0.55
Shank1-203ENSMUST00000107938 Cetn2Q9R1K9 172 aa18.5■□□□□ 0.55
Shank1-203ENSMUST00000107938 Ankrd36D3Z4K0 1415 aa18.5■□□□□ 0.55
Shank1-203ENSMUST00000107938 Gbp7Q91Z40 638 aa18.5■□□□□ 0.55
Shank1-203ENSMUST00000107938 Olfml1Q8BSH2 233 aa18.49■□□□□ 0.55
Shank1-203ENSMUST00000107938 Phldb1Q6PDH0 1371 aaKnown RBP18.49■□□□□ 0.55
Shank1-203ENSMUST00000107938 Akap8Q9DBR0 687 aaKnown RBP18.49■□□□□ 0.55
Shank1-203ENSMUST00000107938 Gbp6A0A0G2JDV3 611 aa18.49■□□□□ 0.55
Shank1-203ENSMUST00000107938 Gm43302L7N1X8 611 aa18.49■□□□□ 0.55
Shank1-203ENSMUST00000107938 Sdccag8Q80UF4 717 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Rab11fip3Q8CHD8 1047 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Gm10471E9Q1C7 252 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 EsrrbQ61539 433 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Atp6v1aP50516 617 aaKnown RBP18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Wdr33Q8K4P0 1330 aaKnown RBP18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Smtnl1Q99LM3 459 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Sem1P60897 70 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Gucy1a3Q9ERL9 691 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Map3k9Q3U1V8 1077 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Mkrn1Q9QXP6 481 aa18.48■□□□□ 0.55
Shank1-203ENSMUST00000107938 Gm20521D3Z5F7 333 aa18.47■□□□□ 0.55
Shank1-203ENSMUST00000107938 Lrrc23O35125 340 aa18.47■□□□□ 0.55
Shank1-203ENSMUST00000107938 Lamb3Q61087 1168 aa18.47■□□□□ 0.55
Shank1-203ENSMUST00000107938 Akap2O54931 893 aa18.47■□□□□ 0.55
Shank1-203ENSMUST00000107938 Sept7O55131 436 aa18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 Q3TQI7 289 aaKnown RBP18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 Limch1Q3UH68 1057 aa18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 Irx6Q9ER75 438 aa18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 Golga3P55937 1487 aa18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 ClgnP52194 611 aa18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 L1td1Q587J6 782 aaKnown RBP18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 U2af1Q9D883 239 aaKnown RBP18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 Ccdc93Q7TQK5 629 aa18.46■□□□□ 0.55
Shank1-203ENSMUST00000107938 Tceal9Q9DD24 104 aa18.45■□□□□ 0.54
Shank1-203ENSMUST00000107938 Kif5cP28738 956 aaKnown RBP18.45■□□□□ 0.54
Shank1-203ENSMUST00000107938 SncbQ91ZZ3 133 aa18.45■□□□□ 0.54
Shank1-203ENSMUST00000107938 Ccdc18Q640L5 1455 aa18.45■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms