RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 P2rx7Q9Z1M0 595 aa25.71■■□□□ 1.71
Ttc39a-203ENSMUST00000106619 Atf3Q60765 181 aa25.7■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 CemipQ8BI06 1361 aa25.7■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Kcna6Q61923 529 aa25.69■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Cdk12Q14AX6 1484 aaKnown RBP25.68■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Frmpd2A0A140LI67 1392 aa25.68■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Chd4Q6PDQ2 1915 aaKnown RBP25.68■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Kiaa1107Q80TK0 1369 aa25.68■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Mdc1Q5PSV9 1707 aa25.66■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Wdr17E9Q271 1322 aa25.64■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Mak16Q8BGS0 296 aaKnown RBP25.64■■□□□ 1.7
Ttc39a-203ENSMUST00000106619 Birc3O08863 600 aa25.64■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Trim28Q62318 834 aa25.64■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Farp2Q91VS8 1065 aa25.64■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 GsdmaQ9EST1 446 aa25.64■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Slc35g1Q8BY79 368 aa25.63■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Brinp3Q499E0 766 aa25.61■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Ubr1O70481 1757 aa25.61■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Esx1O88933 382 aa25.6■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Znf710Q3U288 666 aa25.6■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Scaf1Q5U4C3 1256 aaKnown RBP25.59■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Dennd6aQ8BH65 605 aa25.59■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Scn7aB1AYL1 1681 aa25.59■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Fyb1O35601 819 aa25.58■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 Nlgn1Q99K10 843 aa25.58■■□□□ 1.69
Ttc39a-203ENSMUST00000106619 DccP70211 1447 aa25.57■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Ppp1r15aP17564 657 aa25.56■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Tsen2Q6P7W5 460 aa25.55■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 TimelessQ9R1X4 1197 aa25.55■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Fam135bQ9DAI6 1403 aa25.55■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Gm21190A0A0G2JGJ6 266 aa25.54■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 GnpatP98192 678 aa25.54■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Gimap6Q8K349 305 aa25.54■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Ncoa4Q5U4H9 625 aa25.53■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Ncapd2Q8K2Z4 1392 aa25.52■■□□□ 1.68
Ttc39a-203ENSMUST00000106619 Map4k4P97820 1233 aaKnown RBP25.51■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Golga2Q921M4 999 aa25.51■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Usp19Q3UJD6 1360 aa25.51■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Map2P20357 1828 aa25.51■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Ofd1Q80Z25 1017 aa25.5■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Slc12a5Q91V14 1138 aa25.5■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 U2af1Q9D883 239 aaKnown RBP25.5■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 FancaQ9JL70 1439 aa25.5■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Uhrf1bp1lA2RSJ4 1457 aa25.49■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Ano8Q6PB70 1060 aa25.49■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Cabp4Q8VHC5 271 aa25.49■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Rad17Q6NXW6 688 aa25.46■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Nckap5lQ6GQX2 1323 aa25.46■■□□□ 1.67
Ttc39a-203ENSMUST00000106619 Rsph6aQ8CDR2 708 aa25.45■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Uspl1Q3ULM6 1089 aa25.43■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Ddx17Q501J6 650 aaKnown RBP25.43■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Nfat5Q9WV30 1534 aa25.43■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Zfp444Q3TDV8 331 aaKnown RBP25.42■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Znf541Q0GGX2 1363 aa25.41■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Robo1O89026 1612 aa25.41■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Kcnh5Q920E3 988 aa25.41■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 PalmQ9Z0P4 383 aa25.41■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 PtprvP70289 1705 aa25.4■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 CrbnQ8C7D2 445 aa25.4■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Anks4bQ8K3X6 423 aa25.4■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Siglec1Q62230 1695 aa25.4■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Fchsd2Q3USJ8 740 aa25.39■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Kif24Q6NWW5 1356 aa25.39■■□□□ 1.66
Ttc39a-203ENSMUST00000106619 Tet3Q8BG87 1668 aa25.39■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Eif4a2P10630 407 aa25.39■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Dixdc1Q80Y83 711 aa25.39■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Zmym3Q9JLM4 1370 aa25.36■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Dzip1Q8BMD2 852 aa25.36■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Spef2Q8C9J3 1734 aa25.36■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Atp7bQ64446 1462 aa25.36■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Rad21Q61550 635 aaKnown RBP25.36■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Tcerg1Q8CGF7 1100 aaKnown RBP25.36■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Hoxc9P09633 260 aa25.35■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Ncbp3Q8BZR9 615 aaKnown RBP25.35■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Apaf1O88879 1249 aa25.34■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Zfp777B9EKF4 885 aa25.33■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Atp10bB1AWN4 1474 aa25.33■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 PaskQ8CEE6 1383 aa25.33■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 TatQ8QZR1 454 aa25.33■■□□□ 1.65
Ttc39a-203ENSMUST00000106619 Mapk8ip3Q9ESN9 1337 aa25.33■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Abca15E9PWH4 1668 aa25.32■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Bcl9lQ67FY2 1494 aa25.31■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Fmnl2A2APV2 1086 aa25.31■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Speer4f1Q9D5Q6 258 aa25.31■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Ralbp1Q62172 648 aa25.31■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 TnrQ8BYI9 1358 aa25.3■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Ptpn23Q6PB44 1692 aa25.3■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Ttll13A4Q9F6 804 aa25.29■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Ciz1Q8VEH2 845 aa25.29■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Q4VA45 678 aa25.28■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Gimap5Q8BWF2 308 aa25.28■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Cadps2Q8BYR5 1297 aa25.28■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Dnajc10Q9DC23 793 aa25.28■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Parp14Q2EMV9 1817 aa25.27■■□□□ 1.64
Ttc39a-203ENSMUST00000106619 Uhrf1bp1B2KF50 1429 aa25.26■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Cavin4A2AMM0 362 aa25.26■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Ccne1Q61457 408 aa25.26■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Tmem132eQ6IEE6 982 aa25.26■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Tnnt3Q9QZ47 272 aa25.26■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Nid2O88322 1403 aa25.26■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms