RNA–Protein interactions for RNA: ENSMUST00000102632.6

Sort1-201, Transcript of Sortilin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sort1, Length 6,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-201ENSMUST00000102632 Dnajc2P54103 621 aaKnown RBP21,32■■□□□ 1
Sort1-201ENSMUST00000102632 Babam1Q3UI43 333 aa21,32■■□□□ 1
Sort1-201ENSMUST00000102632 Dusp9Q7TNL7 452 aa21,32■■□□□ 1
Sort1-201ENSMUST00000102632 Kiaa1211Q5PR69 1207 aa21,32■■□□□ 1
Sort1-201ENSMUST00000102632 Kcnj4P52189 445 aa21,31■■□□□ 1
Sort1-201ENSMUST00000102632 Vps37dQ810I0 261 aa21,31■■□□□ 1
Sort1-201ENSMUST00000102632 TkfcQ8VC30 578 aa21,31■■□□□ 1
Sort1-201ENSMUST00000102632 ZgpatQ8VDM1 511 aa21,31■■□□□ 1
Sort1-201ENSMUST00000102632 HmmrQ00547 794 aaKnown RBP21,31■■□□□ 1
Sort1-201ENSMUST00000102632 Ggnbp2Q5SV77 696 aa21,31■■□□□ 1
Sort1-201ENSMUST00000102632 Casq1O09165 405 aa21,31■■□□□ 1
Sort1-201ENSMUST00000102632 Ttll12Q3UDE2 639 aa21,31■■□□□ 1
Sort1-201ENSMUST00000102632 Zscan10Q3URR7 782 aa21,3■■□□□ 1
Sort1-201ENSMUST00000102632 Rai14Q9EP71 979 aaKnown RBP21,29■■□□□ 1
Sort1-201ENSMUST00000102632 Map7d2A2AG50 781 aa21,29■■□□□ 1
Sort1-201ENSMUST00000102632 Tut1Q8R3F9 869 aa21,29■■□□□ 1
Sort1-201ENSMUST00000102632 Nsfl1cQ9CZ44 370 aaKnown RBP21,29■■□□□ 1
Sort1-201ENSMUST00000102632 Cyp46a1Q9WVK8 500 aa21,29■■□□□ 1
Sort1-201ENSMUST00000102632 Cspp1B2RX88 1205 aa21,28■■□□□ 1
Sort1-201ENSMUST00000102632 Ssr1Q9CY50 286 aaKnown RBP21,28■■□□□ 1
Sort1-201ENSMUST00000102632 Rock1P70335 1354 aa21,28■■□□□ 1
Sort1-201ENSMUST00000102632 Kif20aP97329 887 aa21,28■■□□□ 1
Sort1-201ENSMUST00000102632 Cfap99A0A140LIX9 648 aa21,28■■□□□ 1
Sort1-201ENSMUST00000102632 PogkQ80TC5 607 aa21,27■■□□□ 1
Sort1-201ENSMUST00000102632 IncenpQ9WU62 880 aa21,27■■□□□ 1
Sort1-201ENSMUST00000102632 Zcwpw1Q6IR42 630 aa21,26■□□□□ 0,99
Sort1-201ENSMUST00000102632 Dapk1Q80YE7 1442 aa21,26■□□□□ 0,99
Sort1-201ENSMUST00000102632 Znf710Q3U288 666 aa21,26■□□□□ 0,99
Sort1-201ENSMUST00000102632 Rsph3aQ3UFY4 516 aa21,26■□□□□ 0,99
Sort1-201ENSMUST00000102632 Smarca4Q3TKT4 1613 aaKnown RBP21,26■□□□□ 0,99
Sort1-201ENSMUST00000102632 Smg6P61406 1418 aaKnown RBP21,25■□□□□ 0,99
Sort1-201ENSMUST00000102632 NaspQ99MD9 773 aaKnown RBP21,25■□□□□ 0,99
Sort1-201ENSMUST00000102632 Pank1Q8K4K6 548 aa21,25■□□□□ 0,99
Sort1-201ENSMUST00000102632 Tom1O88746 492 aa21,24■□□□□ 0,99
Sort1-201ENSMUST00000102632 Necab1Q8BG18 352 aa21,24■□□□□ 0,99
Sort1-201ENSMUST00000102632 Ankrd13dQ6PD24 605 aa21,23■□□□□ 0,99
Sort1-201ENSMUST00000102632 Matr3Q8K310 846 aaKnown RBP21,23■□□□□ 0,99
Sort1-201ENSMUST00000102632 Rrs1Q9CYH6 365 aaKnown RBP21,23■□□□□ 0,99
Sort1-201ENSMUST00000102632 Psmd1Q3TXS7 953 aa21,23■□□□□ 0,99
Sort1-201ENSMUST00000102632 Lrrfip2Q91WK0 415 aa21,22■□□□□ 0,99
Sort1-201ENSMUST00000102632 Nol7Q9D7Z3 254 aaKnown RBP21,22■□□□□ 0,99
Sort1-201ENSMUST00000102632 Nap1l2P51860 460 aa21,22■□□□□ 0,99
Sort1-201ENSMUST00000102632 Atad2bE9Q166 1460 aaKnown RBP21,22■□□□□ 0,99
Sort1-201ENSMUST00000102632 TrhQ62361 256 aa21,21■□□□□ 0,99
Sort1-201ENSMUST00000102632 Gtpbp6Q3U6U5 514 aa21,21■□□□□ 0,99
Sort1-201ENSMUST00000102632 Ccdc155Q80VJ8 648 aa21,21■□□□□ 0,99
Sort1-201ENSMUST00000102632 Zfp644E9QA22 1323 aa21,2■□□□□ 0,98
Sort1-201ENSMUST00000102632 Polr3dQ91WD1 398 aa21,2■□□□□ 0,98
Sort1-201ENSMUST00000102632 Gcom1E9PZ54 550 aa21,2■□□□□ 0,98
Sort1-201ENSMUST00000102632 MyzapQ3UIJ9 466 aa21,2■□□□□ 0,98
Sort1-201ENSMUST00000102632 Znf18Q810A1 556 aa21,2■□□□□ 0,98
Sort1-201ENSMUST00000102632 Spty2d1Q68FG3 682 aa21,19■□□□□ 0,98
Sort1-201ENSMUST00000102632 Nsd2Q8BVE8 1365 aa21,19■□□□□ 0,98
Sort1-201ENSMUST00000102632 Ipo4Q8VI75 1082 aa21,19■□□□□ 0,98
Sort1-201ENSMUST00000102632 Armc3A2AU72 881 aa21,18■□□□□ 0,98
Sort1-201ENSMUST00000102632 Fkbp5Q64378 456 aa21,18■□□□□ 0,98
Sort1-201ENSMUST00000102632 Rufy1Q8BIJ7 712 aa21,18■□□□□ 0,98
Sort1-201ENSMUST00000102632 Gm10563F6WIE4 79 aa21,18■□□□□ 0,98
Sort1-201ENSMUST00000102632 Msl1Q6PDM1 616 aa21,18■□□□□ 0,98
Sort1-201ENSMUST00000102632 Pde3aQ9Z0X4 1141 aa21,18■□□□□ 0,98
Sort1-201ENSMUST00000102632 Psma5Q9Z2U1 241 aaKnown RBP21,17■□□□□ 0,98
Sort1-201ENSMUST00000102632 Apaf1O88879 1249 aa21,17■□□□□ 0,98
Sort1-201ENSMUST00000102632 Cnksr2Q80YA9 1032 aa21,16■□□□□ 0,98
Sort1-201ENSMUST00000102632 Cwc27Q3TKY6 469 aa21,16■□□□□ 0,98
Sort1-201ENSMUST00000102632 Dixdc1Q80Y83 711 aa21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Serpina10Q8R121 448 aa21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Ipo9Q91YE6 1041 aa21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Mrvi1Q9WUX5 899 aaKnown RBP21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Nek4Q9Z1J2 792 aa21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Tnni2P13412 182 aa21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Plekhg2Q6KAU7 1340 aa21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Ltv1Q6NSQ7 470 aaKnown RBP21,15■□□□□ 0,98
Sort1-201ENSMUST00000102632 Slc5a1Q8C3K6 665 aa21,14■□□□□ 0,98
Sort1-201ENSMUST00000102632 OptnQ8K3K8 584 aa21,14■□□□□ 0,97
Sort1-201ENSMUST00000102632 Smarcc1P97496 1104 aa21,14■□□□□ 0,97
Sort1-201ENSMUST00000102632 Skida1Q80YR3 822 aa21,13■□□□□ 0,97
Sort1-201ENSMUST00000102632 Smc2Q8CG48 1191 aaKnown RBP21,13■□□□□ 0,97
Sort1-201ENSMUST00000102632 Iqgap2Q3UQ44 1575 aa21,13■□□□□ 0,97
Sort1-201ENSMUST00000102632 Exoc5Q3TPX4 708 aa21,13■□□□□ 0,97
Sort1-201ENSMUST00000102632 Tpd52l2Q9CYZ2 220 aaKnown RBP21,13■□□□□ 0,97
Sort1-201ENSMUST00000102632 TprnA2AI08 749 aaKnown RBP21,12■□□□□ 0,97
Sort1-201ENSMUST00000102632 VgfQ0VGU4 617 aa21,12■□□□□ 0,97
Sort1-201ENSMUST00000102632 Ccdc30Q8BVF4 654 aa21,12■□□□□ 0,97
Sort1-201ENSMUST00000102632 Cc2d2aQ8CFW7 1633 aa21,12■□□□□ 0,97
Sort1-201ENSMUST00000102632 Washc2Q6PGL7 1334 aa21,11■□□□□ 0,97
Sort1-201ENSMUST00000102632 Gnai2P08752 355 aaKnown RBP21,11■□□□□ 0,97
Sort1-201ENSMUST00000102632 Prpf4bQ61136 1007 aaKnown RBP21,11■□□□□ 0,97
Sort1-201ENSMUST00000102632 Samm50Q8BGH2 469 aa21,11■□□□□ 0,97
Sort1-201ENSMUST00000102632 Eif3bQ8JZQ9 803 aaKnown RBP21,11■□□□□ 0,97
Sort1-201ENSMUST00000102632 NsmfQ99NF2 532 aa21,11■□□□□ 0,97
Sort1-201ENSMUST00000102632 InsrP15208 1372 aa21,1■□□□□ 0,97
Sort1-201ENSMUST00000102632 Ccdc85cE9Q6B2 420 aa21,1■□□□□ 0,97
Sort1-201ENSMUST00000102632 Arhgap31A6X8Z5 1425 aa21,1■□□□□ 0,97
Sort1-201ENSMUST00000102632 Dph6Q9CQ28 267 aa21,1■□□□□ 0,97
Sort1-201ENSMUST00000102632 Tmod2Q9JKK7 351 aa21,1■□□□□ 0,97
Sort1-201ENSMUST00000102632 Ifit1bl2Q3U687 466 aa21,09■□□□□ 0,97
Sort1-201ENSMUST00000102632 Cd109Q8R422 1442 aa21,09■□□□□ 0,97
Sort1-201ENSMUST00000102632 Jdp2P97875 163 aa21,09■□□□□ 0,97
Sort1-201ENSMUST00000102632 Q3UJC8 639 aa21,09■□□□□ 0,97
Sort1-201ENSMUST00000102632 Lrrc45Q8CIM1 670 aa21,09■□□□□ 0,97
Retrieved 100 of 22,080 RNA–protein pairs in 15,1 ms