RNA–Protein interactions for RNA: ENSMUST00000072008.10

Sh3rf2-201, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf2, Length 5,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-201ENSMUST00000072008 Smc3Q9CW03 1217 aaKnown RBP12.38□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Nphp1Q9QY53 687 aa12.38□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Ccdc183A2AJB1 534 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 PalmQ9Z0P4 383 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Naip5Q9R016 1403 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 MsnP26041 577 aaKnown RBP12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 ChgaP26339 463 aaKnown RBP12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Tpm2P58774 284 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Ints3Q7TPD0 1041 aaKnown RBP12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 1700010I14RikQ7TPG0 532 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Cdc37l1Q9CZP7 335 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Camsap2Q8C1B1 1461 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Cplx1P63040 134 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Gm156Q58A37 223 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 RalgapbQ8BQZ4 1484 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Idi2Q8BFZ6 227 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Rhot2Q8JZN7 620 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Tubb6Q922F4 447 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Ncoa1P70365 1447 aa12.37□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Noc3lQ8VI84 807 aaKnown RBP12.36□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Wdr7Q920I9 1489 aa12.36□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Pbrm1Q8BSQ9 1634 aaKnown RBP12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Samd9lQ69Z37 1561 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Tpm1P58771 284 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Bcl2l13P59017 434 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Hook1Q8BIL5 728 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Tpm3P21107 285 aaKnown RBP12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 TmpoQ61033 693 aaKnown RBP12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Lrrcc1Q69ZB0 1026 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Speer4bQ9D9F7 267 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 PxdnQ3UQ28 1475 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Hoxb7P09024 217 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Tpm4Q6IRU2 248 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Rrp12Q6P5B0 1295 aaKnown RBP12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 AnlnQ8K298 1121 aaKnown RBP12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Ddx54Q8K4L0 874 aaKnown RBP12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Dnajc5bQ9CQ94 199 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Nek4Q9Z1J2 792 aa12.35□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Gm21663A0A0G2JE01 267 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Gm21680A0A0G2JGR8 267 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Gm7361D3Z6R1 267 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 5031410I06RikE9Q4E0 267 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Gm1979E9QAN3 267 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Gm5862K7N5V5 267 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Gm10220K7N660 267 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Fkbp4P30416 458 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Zmym3Q9JLM4 1370 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Peg3Q3URU2 1571 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Cyb5rlB1AS42 316 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Kri1Q8VDQ9 704 aaKnown RBP12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 ScaperF8VQ70 1398 aaKnown RBP12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Phactr2B1AVP0 632 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Atp7aQ64430 1491 aa12.34□□□□□ -0.43
Sh3rf2-201ENSMUST00000072008 Arhgef12Q8R4H2 1543 aaKnown RBP12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Nutm1Q8BHP2 1126 aa12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Abcc1O35379 1528 aa12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 BcanQ61361 883 aa12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 KarsQ99MN1 595 aaKnown RBP12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Becn1O88597 448 aa12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Krt82Q99M74 516 aa12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Nup160Q9Z0W3 1402 aaKnown RBP12.33□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Ipo7Q9EPL8 1038 aaKnown RBP12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Sall3Q62255 1320 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Ttll13A4Q9F6 804 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Trim34bJ3QNR8 485 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Trim29Q8R2Q0 587 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 BccipQ9CWI3 316 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Cfap99A0A140LIX9 648 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Kif4P33174 1231 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Rec8Q8C5S7 591 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Kif21aQ9QXL2 1672 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Gm10563F6WIE4 79 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Odf2lQ9D478 642 aa12.32□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Ubap1lG3UW59 384 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Adgrl2Q8JZZ7 1487 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Rfx1P48377 963 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Ccp110Q7TSH4 1004 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Trim34aQ99PP6 485 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 MvpQ9EQK5 861 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Gtf3c3Q3TMP1 882 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Btbd11Q6GQW0 1109 aa12.31□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Me1P06801 572 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Hs1bp3Q3TC93 395 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Vps53Q8CCB4 832 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Rapgef4Q9EQZ6 1011 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Prex2Q3LAC4 1598 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Gripap1Q8VD04 806 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Bicd2Q921C5 820 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 SlkO54988 1233 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Cers3Q1A3B0 383 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Mum1Q6DID5 682 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Gpatch3Q8BIY1 525 aa12.3□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Erich3F6QRE9 1637 aa12.29□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 TimelessQ9R1X4 1197 aa12.29□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Hmgn5Q9JL35 406 aa12.29□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Elp1Q7TT37 1333 aaKnown RBP12.29□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Wwc1Q5SXA9 1104 aa12.29□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 3425401B19RikD3Z1D3 1412 aa12.28□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 InsrP15208 1372 aa12.28□□□□□ -0.44
Sh3rf2-201ENSMUST00000072008 Talpid3E9PV87 1520 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms