RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 TimelessQ9R1X4 1197 aa12.35□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 G3bp1P97855 465 aaKnown RBP12.34□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Kcnh5Q920E3 988 aa12.34□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Gm32742A0A1B0GT42 1604 aa12.34□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 GorabQ8BRM2 368 aa12.34□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Zeb2Q9R0G7 1215 aa12.34□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Pibf1E9Q6K3 756 aa12.34□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Naip7Q9JIB3 1402 aa12.34□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 TkfcQ8VC30 578 aa12.33□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Edc4Q3UJB9 1406 aaKnown RBP12.33□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Eif2s2Q99L45 331 aaKnown RBP12.33□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Plekhd1B2RPU2 505 aa12.32□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Mre11Q61216 706 aa12.32□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Dixdc1Q80Y83 711 aa12.32□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 MccE9PWI3 1003 aa12.31□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 AampJ3QN89 436 aa12.31□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Pdcl3Q8BVF2 240 aa12.31□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 IbtkQ6ZPR6 1352 aaKnown RBP12.31□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Pprc1Q6NZN1 1644 aa12.31□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Sugp2Q8CH09 1067 aa12.3□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Cc2d1aQ8K1A6 943 aa12.3□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Zranb1Q7M760 708 aa12.29□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Ppip5k1A2ARP1 1436 aa12.29□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Ccdc146E9Q9F7 977 aa12.29□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Eif4g2Q62448 906 aaKnown RBP12.29□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Apaf1O88879 1249 aa12.29□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 HypkQ9CR41 129 aa12.29□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Lrrc7Q80TE7 1490 aa12.28□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Kiaa0556Q8C753 1610 aa12.28□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Frmpd2A0A140LI67 1392 aa12.28□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 MpripP97434 1024 aa12.28□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Dzip1Q8BMD2 852 aa12.28□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Myom2Q14BI5 1463 aa12.28□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Neurl4Q5NCX5 1563 aa12.27□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 RereQ80TZ9 1558 aa12.27□□□□□ -0.44
Cpsf1-201ENSMUST00000071898 Ccdc183A2AJB1 534 aa12.27□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 KarsQ99MN1 595 aaKnown RBP12.27□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 PalldQ9ET54 1408 aa12.27□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Atl3Q91YH5 541 aa12.27□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Cdc42bpgQ80UW5 1551 aa12.26□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Qtrt2B8ZXI1 415 aa12.26□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Casc1Q6TDU8 730 aa12.26□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Emilin2Q8K482 1074 aa12.26□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Kdm5cP41230 1554 aa12.26□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Rbm25B2RY56 838 aaKnown RBP12.26□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Cgnl1Q6AW69 1298 aa12.26□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Gm21680A0A0G2JGR8 267 aa12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 AU022751B1B0V2 589 aa12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Ppm1fQ8CGA0 452 aa12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Swt1Q9DBQ9 907 aa12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Cul7Q8VE73 1689 aa12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 PtmsQ9D0J8 101 aaKnown RBP12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Kif14L0N7N1 1674 aaKnown RBP12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 InsrP15208 1372 aa12.25□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Speer4bQ9D9F7 267 aa12.24□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Abca9Q8K449 1623 aa12.24□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Nol11Q8BJW5 723 aaKnown RBP12.24□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Cpsf1Q9EPU4 1441 aaKnown RBP12.24□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Kidins220E9Q9B7 1793 aa12.24□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Cald1E9QA15 768 aaKnown RBP12.24□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 4930572O03RikQ8C5Y0 211 aa12.24□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Zmym4A2A791 1549 aaKnown RBP12.23□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Nectin2P32507 530 aa12.23□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Cavin4A2AMM0 362 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Gnai1B2RSH2 354 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Gnai3Q9DC51 354 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Rabep1O35551 862 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Nutm1Q8BHP2 1126 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Usp16Q99LG0 825 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Adgrb3Q80ZF8 1522 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 RalgapbQ8BQZ4 1484 aa12.22□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Kcna6Q61923 529 aa12.21□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Mug2P28666 1451 aa12.21□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 PtprmP28828 1452 aa12.21□□□□□ -0.45
Cpsf1-201ENSMUST00000071898 Cadps2Q8BYR5 1297 aa12.21□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Zmym3Q9JLM4 1370 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Dusp27Q148W8 1138 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Fam43aQ8BUP8 424 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Chrna2Q91X60 512 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Kank1E9Q238 1360 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Rsph3aQ3UFY4 516 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 NinlQ6ZQ12 1394 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Ppp2r3aB2RXC8 1150 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Triml2E9PW10 424 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Idi1P58044 227 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Liat1Q810M6 228 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Erich6bQ9D4S6 220 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Fhod3Q76LL6 1578 aa12.2□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Fam50bQ9WTJ8 334 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Knl1Q66JQ7 1612 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Gm21663A0A0G2JE01 267 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Gm7361D3Z6R1 267 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 5031410I06RikE9Q4E0 267 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Gm1979E9QAN3 267 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Gm5862K7N5V5 267 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Gm10220K7N660 267 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Rfx1P48377 963 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Nol10Q5RJG1 687 aaKnown RBP12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Ccne1Q61457 408 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms