RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Nrxn1Q9CS84 1514 aa11.62□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Gm10093D3YYI8 482 aa11.62□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Hdac1O09106 482 aaKnown RBP11.62□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Eif2ak4Q9QZ05 1648 aa11.62□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Hfm1D3Z4R1 1434 aa11.62□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Cfap65Q3V0B4 1847 aa11.61□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Pdia4P08003 638 aaKnown RBP11.61□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Naip7Q9JIB3 1402 aa11.61□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Rbm10Q99KG3 930 aaKnown RBP11.61□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Ralbp1Q62172 648 aa11.6□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Kiaa1210E9Q0C6 1637 aa11.6□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Zdhhc9P59268 364 aa11.59□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Ecm2Q5FW85 670 aa11.59□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Bloc1s4Q8VED2 215 aa11.59□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Pank2Q3U4S0 443 aa11.59□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Inpp5bQ8K337 993 aa11.59□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Adgrb3Q80ZF8 1522 aa11.59□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Prex1Q69ZK0 1650 aa11.59□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Brd1E9PZ26 1189 aaKnown RBP11.58□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 InsrP15208 1372 aa11.58□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Kdm4cQ8VCD7 1054 aa11.58□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Golga2Q921M4 999 aa11.58□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Srcin1Q9QWI6 1250 aa11.58□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Nectin2P32507 530 aa11.57□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Arhgap5P97393 1501 aa11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Mfap1aC0HKD8 439 aaKnown RBP11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Mfap1bC0HKD9 439 aaKnown RBP11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Uggt1Q6P5E4 1551 aa11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Kif18aQ91WD7 886 aa11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 SlkO54988 1233 aa11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Isy1Q69ZQ2 285 aaKnown RBP11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Rrp12Q6P5B0 1295 aaKnown RBP11.56□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Cog6Q8R3I3 657 aa11.55□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Tpm2P58774 284 aa11.55□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Neo1P97798 1493 aa11.55□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Lekr1B2RVN1 116 aa11.55□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Gzf1Q4VBD9 706 aa11.55□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Uhrf1bp1B2KF50 1429 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 IbspQ61711 324 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Atl3Q91YH5 541 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Mroh1E0CZ22 1640 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Rfx1P48377 963 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Apaf1O88879 1249 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Tbc1d30Q69ZT9 766 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Bcl11bQ99PV8 884 aa11.54□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Nfatc2ipO09130 412 aa11.53□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Gse1Q3U3C9 1213 aa11.53□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Znf541Q0GGX2 1363 aa11.53□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Fbln2P37889 1221 aa11.53□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Pde4cQ3UEI1 686 aa11.52□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Tfip11Q9ERA6 838 aaKnown RBP11.52□□□□□ -0.56
Ccdc171-201ENSMUST00000053414 Chd1P40201 1711 aa11.52□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Cluap1Q8R3P7 413 aa11.52□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 CltcQ68FD5 1675 aaKnown RBP11.52□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Pik3r4Q8VD65 1358 aa11.51□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Zscan25B2RX31 543 aa11.51□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Bag4Q8CI61 457 aa11.51□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 AatkQ80YE4 1365 aa11.51□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Hs1bp3Q3TC93 395 aa11.51□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Maco1Q7TQE6 664 aaKnown RBP11.5□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Ttc21aQ8C0S4 1314 aa11.5□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Kif20bQ80WE4 1774 aaKnown RBP11.5□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Dnajc5P60904 198 aa11.5□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Ncbp3Q8BZR9 615 aaKnown RBP11.5□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 FanciQ8K368 1330 aa11.49□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Ankrd50F7BE84 1390 aa11.49□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 CastP51125 788 aa11.49□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Tbc1d9Q3UYK3 1264 aa11.49□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Pip4k2bQ80XI4 416 aa11.49□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Rps6ka5Q8C050 863 aa11.49□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Adgrb1Q3UHD1 1582 aa11.49□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Txndc2Q6P902 515 aa11.48□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Topbp1Q6ZQF0 1515 aa11.48□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Pdcl2Q78Y63 240 aa11.48□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Sart1Q9Z315 806 aaKnown RBP11.47□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Atp7bQ64446 1462 aa11.47□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Wdr63B2RY71 923 aa11.47□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Gtpbp6Q3U6U5 514 aa11.47□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Nos1Q9Z0J4 1429 aa11.47□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Rasa1E9PYG6 1038 aa11.47□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Map3k5O35099 1380 aa11.46□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Plxnc1Q9QZC2 1574 aa11.46□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Akap12Q9WTQ5 1684 aa11.46□□□□□ -0.57
Ccdc171-201ENSMUST00000053414 Spag9Q58A65 1321 aaKnown RBP11.46□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 IqubQ8CDK3 788 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Stard8Q8K031 1019 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Psme1P97371 249 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Arfgef2A2A5R2 1792 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Cald1E9QA15 768 aaKnown RBP11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Mindy4Q3UQI9 744 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Ksr2Q3UVC0 959 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 AU022751B1B0V2 589 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Atp2b3Q0VF55 1220 aa11.45□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Nsd3Q6P2L6 1439 aa11.44□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Ddrgk1Q80WW9 315 aa11.44□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 NktrP30415 1453 aa11.44□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Spef2Q8C9J3 1734 aa11.44□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 PplQ9R269 1755 aa11.44□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Q4VA45 678 aa11.44□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 HdgfP51859 237 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms