RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 CenpjQ569L8 1344 aa17.31■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Znf521Q6KAS7 1311 aa17.31■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Srpk2O54781 681 aaKnown RBP17.3■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Znf692Q3U381 531 aa17.29■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Pik3c2bE9QAN8 1632 aa17.29■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Abca14E9Q8F8 1683 aa17.29■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Gm20521D3Z5F7 333 aa17.28■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Kiaa1107Q80TK0 1369 aa17.28■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Slc4a1apE9PX68 744 aa17.27■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Usp40Q8BWR4 1235 aa17.27■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Uspl1Q3ULM6 1089 aa17.27■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 PaskQ8CEE6 1383 aa17.27■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Sox12Q04890 314 aa17.26■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Topaz1E5FYH1 1653 aa17.25■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Hs1bp3Q3TC93 395 aa17.25■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Q7TT23 1179 aa17.25■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Kif7B7ZNG0 1348 aa17.25■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Puf60Q3UEB3 564 aaKnown RBP17.24■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Rwdd1Q9CQK7 243 aa17.24■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Atp7bQ64446 1462 aa17.24■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Rad21Q61550 635 aaKnown RBP17.23■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Slit3Q9WVB4 1523 aa17.23■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Fam43aQ8BUP8 424 aa17.22■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 NalcnQ8BXR5 1738 aa17.22■□□□□ 0.35
Prpf38b-201ENSMUST00000029480 Cdk12Q14AX6 1484 aaKnown RBP17.2■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Kdm2aP59997 1161 aa17.19■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 4930567H17RikQ3V0K5 233 aa17.18■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Chmp4bQ9D8B3 224 aaKnown RBP17.18■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Fan1Q69ZT1 1020 aa17.17■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 IqubQ8CDK3 788 aa17.17■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Tnrc6bQ8BKI2 1810 aaKnown RBP17.17■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Med1Q925J9 1575 aa17.16■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Cald1E9QA15 768 aaKnown RBP17.16■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Mon2Q80TL7 1715 aa17.16■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Pik3r4Q8VD65 1358 aa17.15■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 FanciQ8K368 1330 aa17.15■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 N4bp2F8VQG7 1678 aaKnown RBP17.15■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 4933416C03RikQ3V063 378 aa17.15■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Kif20bQ80WE4 1774 aaKnown RBP17.15■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Smc5Q8CG46 1101 aaKnown RBP17.15■□□□□ 0.34
Prpf38b-201ENSMUST00000029480 Rimbp3Q3V0F0 1606 aa17.14■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 MlecQ6ZQI3 291 aaKnown RBP17.13■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 GphnQ8BUV3 769 aaKnown RBP17.13■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Ccdc30Q8BVF4 654 aa17.13■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Os9Q8K2C7 672 aa17.13■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Golga2Q921M4 999 aa17.13■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Scn7aB1AYL1 1681 aa17.12■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Slit2Q9R1B9 1521 aa17.12■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 EspnQ9ET47 871 aa17.12■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Fchsd2Q3USJ8 740 aa17.12■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Brwd3A2AHJ4 1799 aa17.12■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 PtpruB1AUH1 1446 aa17.11■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Hoxb7P09024 217 aa17.11■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Shq1Q7TMX5 569 aa17.11■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 4933402E13RikQ9D4D2 429 aa17.11■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Ptpn23Q6PB44 1692 aa17.1■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 AcrbpQ3V140 540 aa17.1■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Sirt1Q923E4 737 aa17.1■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 PzpQ61838 1495 aa17.09■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Txndc2Q6P902 515 aa17.09■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Phlpp1Q8CHE4 1687 aa17.09■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Esx1O88933 382 aa17.09■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 MyclP10166 368 aa17.09■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 ChgaP26339 463 aaKnown RBP17.09■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Myo5bP21271 1818 aa17.08■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Psme1P97371 249 aa17.08■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Trim58Q5NCC9 485 aa17.08■□□□□ 0.33
Prpf38b-201ENSMUST00000029480 Brd2Q7JJ13 798 aaKnown RBP17.08■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 GsdmaQ9EST1 446 aa17.08■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Cep170bQ80U49 1574 aa17.08■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 BbxQ8VBW5 907 aa17.07■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Znf335A2A5K6 1337 aa17.06■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Atl3Q91YH5 541 aa17.06■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 D430041D05RikF6ZGR6 1678 aa17.06■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Podxl2Q8CAE9 603 aa17.05■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Q9D9H8 365 aa17.05■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 IghaA0A0A6YXW6 389 aa17.05■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Ccdc171E9Q1U1 1324 aa17.05■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Rad17Q6NXW6 688 aa17.05■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Trpm3Q5F4S9 1721 aa17.04■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Dcaf11Q91VU6 549 aa17.04■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Ttll13A4Q9F6 804 aa17.03■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Nlrp6Q91WS2 869 aa17.03■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 CrbnQ8C7D2 445 aa17.02■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Ttc21aQ8C0S4 1314 aa17.02■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 B4galnt3Q6L8S8 986 aa17.02■□□□□ 0.32
Prpf38b-201ENSMUST00000029480 Atp1b4Q99ME6 356 aa17.02■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Trim28Q62318 834 aa17.01■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Tet3Q8BG87 1668 aa17.01■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Stag3O70576 1240 aa17■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Ppm1gQ61074 542 aa17■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Hoxa7P02830 229 aa17■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Speer4f1Q9D5Q6 258 aa16.99■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Thsd7aQ69ZU6 1645 aa16.99■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Asxl2Q8BZ32 1370 aa16.99■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Als2Q920R0 1651 aa16.99■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Nom1Q3UFM5 854 aaKnown RBP16.98■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Unc13bQ9Z1N9 1602 aa16.98■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Ccar1Q8CH18 1146 aaKnown RBP16.98■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 C5P06684 1680 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms