RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Ccdc60Q8C4J0 545 aa14.43□□□□□ -0.1
Vps54-201ENSMUST00000006221 Knl1Q66JQ7 1612 aa14.43□□□□□ -0.1
Vps54-201ENSMUST00000006221 Dip2cE9PWR4 1557 aa14.43□□□□□ -0.1
Vps54-201ENSMUST00000006221 Maco1Q7TQE6 664 aaKnown RBP14.43□□□□□ -0.1
Vps54-201ENSMUST00000006221 Hecw2Q6I6G8 1578 aa14.43□□□□□ -0.1
Vps54-201ENSMUST00000006221 Eif2ak4Q9QZ05 1648 aa14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 Cdc42bpgQ80UW5 1551 aa14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 Mfap1aC0HKD8 439 aaKnown RBP14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 Mfap1bC0HKD9 439 aaKnown RBP14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 Tbc1d32Q3URV1 1296 aa14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 Q9D9H8 365 aa14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 NinlQ6ZQ12 1394 aa14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 Prrc2bQ7TPM1 1486 aaKnown RBP14.42□□□□□ -0.1
Vps54-201ENSMUST00000006221 Yeats2Q3TUF7 1407 aa14.41□□□□□ -0.1
Vps54-201ENSMUST00000006221 Med14A2ABV5 1459 aaKnown RBP14.41□□□□□ -0.1
Vps54-201ENSMUST00000006221 Nectin2P32507 530 aa14.41□□□□□ -0.1
Vps54-201ENSMUST00000006221 AdgbG3UZ78 1657 aa14.41□□□□□ -0.1
Vps54-201ENSMUST00000006221 Rbm25B2RY56 838 aaKnown RBP14.41□□□□□ -0.1
Vps54-201ENSMUST00000006221 Spryd3E9Q9B3 442 aa14.4□□□□□ -0.1
Vps54-201ENSMUST00000006221 Aplp1Q03157 653 aa14.4□□□□□ -0.1
Vps54-201ENSMUST00000006221 Slc12a5Q91V14 1138 aa14.4□□□□□ -0.1
Vps54-201ENSMUST00000006221 AglF8VPN4 1532 aa14.4□□□□□ -0.1
Vps54-201ENSMUST00000006221 Ankrd50F7BE84 1390 aa14.4□□□□□ -0.1
Vps54-201ENSMUST00000006221 Atl3Q91YH5 541 aa14.4□□□□□ -0.11
Vps54-201ENSMUST00000006221 Atp2b2Q9R0K7 1198 aa14.4□□□□□ -0.11
Vps54-201ENSMUST00000006221 Cavin4A2AMM0 362 aa14.39□□□□□ -0.11
Vps54-201ENSMUST00000006221 Cdk19Q8BWD8 501 aa14.39□□□□□ -0.11
Vps54-201ENSMUST00000006221 RereQ80TZ9 1558 aa14.39□□□□□ -0.11
Vps54-201ENSMUST00000006221 Gsto1O09131 240 aa14.39□□□□□ -0.11
Vps54-201ENSMUST00000006221 Utp14aQ640M1 767 aaKnown RBP14.39□□□□□ -0.11
Vps54-201ENSMUST00000006221 Rabep1O35551 862 aa14.39□□□□□ -0.11
Vps54-201ENSMUST00000006221 Ttc21aQ8C0S4 1314 aa14.39□□□□□ -0.11
Vps54-201ENSMUST00000006221 Kif2cQ922S8 721 aa14.38□□□□□ -0.11
Vps54-201ENSMUST00000006221 PalmQ9Z0P4 383 aa14.38□□□□□ -0.11
Vps54-201ENSMUST00000006221 Phlpp2Q8BXA7 1320 aa14.38□□□□□ -0.11
Vps54-201ENSMUST00000006221 AampJ3QN89 436 aa14.37□□□□□ -0.11
Vps54-201ENSMUST00000006221 Tmco5bQ80X59 307 aa14.37□□□□□ -0.11
Vps54-201ENSMUST00000006221 Q4VA45 678 aa14.37□□□□□ -0.11
Vps54-201ENSMUST00000006221 Kif18aQ91WD7 886 aa14.36□□□□□ -0.11
Vps54-201ENSMUST00000006221 PtprmP28828 1452 aa14.36□□□□□ -0.11
Vps54-201ENSMUST00000006221 Catsper2A2ARP9 588 aa14.36□□□□□ -0.11
Vps54-201ENSMUST00000006221 Arhgap23Q69ZH9 1483 aa14.35□□□□□ -0.11
Vps54-201ENSMUST00000006221 G3bp1P97855 465 aaKnown RBP14.35□□□□□ -0.11
Vps54-201ENSMUST00000006221 Ncbp3Q8BZR9 615 aaKnown RBP14.35□□□□□ -0.11
Vps54-201ENSMUST00000006221 Htatsf1Q8BGC0 757 aa14.35□□□□□ -0.11
Vps54-201ENSMUST00000006221 Cog6Q8R3I3 657 aa14.35□□□□□ -0.11
Vps54-201ENSMUST00000006221 Antxr1Q9CZ52 562 aa14.35□□□□□ -0.11
Vps54-201ENSMUST00000006221 Qser1A2BIE1 1698 aa14.34□□□□□ -0.11
Vps54-201ENSMUST00000006221 Birc3O08863 600 aa14.34□□□□□ -0.11
Vps54-201ENSMUST00000006221 Znf316Q6PGE4 1016 aa14.33□□□□□ -0.12
Vps54-201ENSMUST00000006221 Swt1Q9DBQ9 907 aa14.32□□□□□ -0.12
Vps54-201ENSMUST00000006221 Asxl2Q8BZ32 1370 aa14.32□□□□□ -0.12
Vps54-201ENSMUST00000006221 Pik3r4Q8VD65 1358 aa14.32□□□□□ -0.12
Vps54-201ENSMUST00000006221 Ahdc1Q6PAL7 1594 aaKnown RBP14.32□□□□□ -0.12
Vps54-201ENSMUST00000006221 Gm156Q58A37 223 aa14.32□□□□□ -0.12
Vps54-201ENSMUST00000006221 Plekhm2Q80TQ5 1018 aa14.32□□□□□ -0.12
Vps54-201ENSMUST00000006221 SkilQ60665 675 aa14.31□□□□□ -0.12
Vps54-201ENSMUST00000006221 Amer1Q7TS75 1132 aa14.31□□□□□ -0.12
Vps54-201ENSMUST00000006221 Mcm10Q0VBD2 885 aa14.31□□□□□ -0.12
Vps54-201ENSMUST00000006221 Q3UPC7 1272 aa14.31□□□□□ -0.12
Vps54-201ENSMUST00000006221 Uhrf1bp1B2KF50 1429 aa14.31□□□□□ -0.12
Vps54-201ENSMUST00000006221 Cul9Q80TT8 1865 aa14.31□□□□□ -0.12
Vps54-201ENSMUST00000006221 Afap1Q80YS6 731 aa14.3□□□□□ -0.12
Vps54-201ENSMUST00000006221 Plin1Q8CGN5 517 aa14.3□□□□□ -0.12
Vps54-201ENSMUST00000006221 Nsd3Q6P2L6 1439 aa14.3□□□□□ -0.12
Vps54-201ENSMUST00000006221 Trim28Q62318 834 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Nsfl1cQ9CZ44 370 aaKnown RBP14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Cdc37l1Q9CZP7 335 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Abca14E9Q8F8 1683 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Brd1E9PZ26 1189 aaKnown RBP14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 NktrP30415 1453 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Adamts7Q68SA9 1657 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Terf2O35144 541 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Pabpn1Q8CCS6 302 aaKnown RBP14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Ccdc171E9Q1U1 1324 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 FanciQ8K368 1330 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 PaskQ8CEE6 1383 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Vamp4O70480 141 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Ciz1Q8VEH2 845 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Map3k19E9Q3S4 1311 aa14.29□□□□□ -0.12
Vps54-201ENSMUST00000006221 Map7O88735 730 aa14.28□□□□□ -0.12
Vps54-201ENSMUST00000006221 Arhgef28P97433 1693 aa14.28□□□□□ -0.12
Vps54-201ENSMUST00000006221 Hs1bp3Q3TC93 395 aa14.27□□□□□ -0.12
Vps54-201ENSMUST00000006221 Rfx1P48377 963 aa14.26□□□□□ -0.13
Vps54-201ENSMUST00000006221 Aldh1l1Q8R0Y6 902 aa14.26□□□□□ -0.13
Vps54-201ENSMUST00000006221 Klhdc4Q921I2 584 aa14.26□□□□□ -0.13
Vps54-201ENSMUST00000006221 Uhrf1bp1lA2RSJ4 1457 aa14.25□□□□□ -0.13
Vps54-201ENSMUST00000006221 Fchsd2Q3USJ8 740 aa14.25□□□□□ -0.13
Vps54-201ENSMUST00000006221 Cabp2Q9JLK4 216 aa14.25□□□□□ -0.13
Vps54-201ENSMUST00000006221 CltcQ68FD5 1675 aaKnown RBP14.25□□□□□ -0.13
Vps54-201ENSMUST00000006221 Naip7Q9JIB3 1402 aa14.25□□□□□ -0.13
Vps54-201ENSMUST00000006221 U2surpQ6NV83 1029 aaKnown RBP14.24□□□□□ -0.13
Vps54-201ENSMUST00000006221 Ssh1Q76I79 1042 aa14.24□□□□□ -0.13
Vps54-201ENSMUST00000006221 GorabQ8BRM2 368 aa14.24□□□□□ -0.13
Vps54-201ENSMUST00000006221 MvpQ9EQK5 861 aa14.24□□□□□ -0.13
Vps54-201ENSMUST00000006221 Tfip11Q9ERA6 838 aaKnown RBP14.24□□□□□ -0.13
Vps54-201ENSMUST00000006221 Atp7bQ64446 1462 aa14.24□□□□□ -0.13
Vps54-201ENSMUST00000006221 Kif13aQ9EQW7 1749 aa14.23□□□□□ -0.13
Vps54-201ENSMUST00000006221 Dmrtc1Q9D9R7 182 aa14.23□□□□□ -0.13
Vps54-201ENSMUST00000006221 Znf541Q0GGX2 1363 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms