RNA–Protein interactions for RNA: ENSMUST00000000619.7

Clcn4-201, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clcn4, Length 4,607 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-201ENSMUST00000000619 Q9D2X8 372 aa13.86□□□□□ -0.19
Clcn4-201ENSMUST00000000619 4933402E13RikQ9D4D2 429 aa13.86□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Cep170Q6A065 1588 aa13.86□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Q3UPC7 1272 aa13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Kiaa1107Q80TK0 1369 aa13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Znf518aB2RRF6 1478 aaKnown RBP13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 AnkarA2RT91 1465 aa13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Rnf17Q99MV7 1640 aa13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Col17a1Q07563 1470 aa13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 PtmsQ9D0J8 101 aaKnown RBP13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Gli2Q0VGT2 1544 aa13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Lrrc7Q80TE7 1490 aa13.85□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Ppp1r15aP17564 657 aa13.84□□□□□ -0.19
Clcn4-201ENSMUST00000000619 HnrnpmQ9D0E1 729 aaKnown RBP13.84□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Phlpp2Q8BXA7 1320 aa13.84□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Mcm10Q0VBD2 885 aa13.84□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Casc1Q6TDU8 730 aa13.84□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Sv2bQ8BG39 683 aa13.84□□□□□ -0.19
Clcn4-201ENSMUST00000000619 CarsQ9ER72 831 aaKnown RBP13.84□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Ttc41Q692V3 1318 aa13.83□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Gm156Q58A37 223 aa13.83□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Ptch1Q61115 1434 aa13.83□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Setd1bQ8CFT2 1985 aa13.83□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Tfip11Q9ERA6 838 aaKnown RBP13.83□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Ggnbp2Q5SV77 696 aa13.82□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Hs1bp3Q3TC93 395 aa13.82□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Iqgap1Q9JKF1 1657 aaKnown RBP13.82□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Slc4a10Q5DTL9 1118 aa13.82□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Rab11fip3Q8CHD8 1047 aa13.82□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Tmc1Q8R4P5 757 aa13.82□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Skint5A7XUY5 1461 aa13.82□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Ssh1Q76I79 1042 aa13.81□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Chmp4cQ9D7F7 232 aa13.81□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Gm32742A0A1B0GT42 1604 aa13.81□□□□□ -0.2
Clcn4-201ENSMUST00000000619 AU022751B1B0V2 589 aa13.81□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Tbc1d32Q3URV1 1296 aa13.81□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Adamts13Q769J6 1426 aa13.81□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Scaf11E9PZM7 1456 aaKnown RBP13.8□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Fam135bQ9DAI6 1403 aa13.8□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Ppp1r3fQ9JIG4 799 aa13.8□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Cyp46a1Q9WVK8 500 aa13.8□□□□□ -0.2
Clcn4-201ENSMUST00000000619 AU019823E9PUQ3 292 aa13.8□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Gprasp1Q5U4C1 1347 aa13.8□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Brpf1B2RRD7 1212 aa13.79□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Myo3aQ8K3H5 1613 aa13.79□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Mcm2P97310 904 aa13.79□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Wwc1Q5SXA9 1104 aa13.79□□□□□ -0.2
Clcn4-201ENSMUST00000000619 PaskQ8CEE6 1383 aa13.79□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Prrc2bQ7TPM1 1486 aaKnown RBP13.79□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Abcc3B2RX12 1523 aa13.78□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Aplp1Q03157 653 aa13.78□□□□□ -0.2
Clcn4-201ENSMUST00000000619 TmpoQ61033 693 aaKnown RBP13.78□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Gcc1Q9D4H2 778 aa13.78□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Phactr2B1AVP0 632 aa13.78□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Talpid3E9PV87 1520 aa13.78□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Setd1aE9PYH6 1716 aa13.78□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Hmox1P14901 289 aa13.77□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Pcmtd1P59913 357 aa13.77□□□□□ -0.2
Clcn4-201ENSMUST00000000619 1700010I14RikQ7TPG0 532 aa13.77□□□□□ -0.2
Clcn4-201ENSMUST00000000619 Filip1lQ6P6L0 1131 aa13.77□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Ankrd50F7BE84 1390 aa13.77□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Klhdc4Q921I2 584 aa13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Ankrd44B2RXR6 993 aa13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Atp6v1dP57746 247 aa13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Sos1Q62245 1319 aa13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Rtn4Q99P72 1162 aaKnown RBP13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 P2rx7Q9Z1M0 595 aa13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Kdm5aQ3UXZ9 1690 aa13.76□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Pnmal2G3X9N3 661 aa13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Smarce1O54941 411 aaKnown RBP13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Asxl2Q8BZ32 1370 aa13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Nos1Q9Z0J4 1429 aa13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Ythdc1E9Q5K9 736 aaKnown RBP13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Idi2Q8BFZ6 227 aa13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Neurl4Q5NCX5 1563 aa13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Smarca5Q91ZW3 1051 aaKnown RBP13.75□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Terf2O35144 541 aa13.74□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Hecw1Q8K4P8 1604 aa13.74□□□□□ -0.21
Clcn4-201ENSMUST00000000619 CatipB9EKE5 520 aa13.74□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Tbc1d9Q3UYK3 1264 aa13.74□□□□□ -0.21
Clcn4-201ENSMUST00000000619 St18Q80TY4 1045 aa13.74□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Dennd6aQ8BH65 605 aa13.74□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Zmym3Q9JLM4 1370 aa13.73□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Wdr63B2RY71 923 aa13.73□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Vamp4O70480 141 aa13.73□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Gnai2P08752 355 aaKnown RBP13.73□□□□□ -0.21
Clcn4-201ENSMUST00000000619 MecomP14404 1042 aa13.73□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Catsper2A2ARP9 588 aa13.73□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Ak9G3UYQ4 1894 aa13.73□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Ppip5k2Q6ZQB6 1129 aa13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 HypkQ9CR41 129 aa13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Zkscan2G3X952 960 aa13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Prkar2bP31324 416 aa13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Rrp12Q6P5B0 1295 aaKnown RBP13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Nphp1Q9QY53 687 aa13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Brd1E9PZ26 1189 aaKnown RBP13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Q3UJC8 639 aa13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Ttc21aQ8C0S4 1314 aa13.72□□□□□ -0.21
Clcn4-201ENSMUST00000000619 Mcm4P49717 862 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms