RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 INTS6Q9UL03 887 aaKnown RBP13.9□□□□□ -0.18
COMMD4-214ENST00000566230 NCKAP1Q9Y2A7 1128 aa13.9□□□□□ -0.18
COMMD4-214ENST00000566230 MID1O15344 667 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 GABBR2O75899 941 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 IGLV3-27P01718 113 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 ITGAVP06756 1048 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 ERCC5P28715 1186 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-214ENST00000566230 HNF1BP35680 557 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 MARSP56192 900 aaKnown RBP13.89□□□□□ -0.19
COMMD4-214ENST00000566230 STX17P56962 302 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 SLC8A3P57103 927 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 RTP5Q14D33 572 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 CST6Q15828 149 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 HNRNPA1L2Q32P51 320 aaKnown RBP13.89□□□□□ -0.19
COMMD4-214ENST00000566230 MPP7Q5T2T1 576 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 MSANTD2Q6P1R3 559 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 RBM43Q6ZSC3 357 aaKnown RBP13.89□□□□□ -0.19
COMMD4-214ENST00000566230 FBXL13Q8NEE6 735 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 UBA3Q8TBC4 463 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 LRRC4Q9HBW1 653 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 RAB20Q9NX57 234 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 ADAMTS1Q9UHI8 967 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 TSPAN16Q9UKR8 245 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 SCML1Q9UN30 329 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 CTNND2Q9UQB3 1225 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 COQ4Q9Y3A0 265 aa13.89□□□□□ -0.19
COMMD4-214ENST00000566230 A0A1W2PP55 124 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 PMM2O15305 246 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 ACSL4O60488 711 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 CDK4P11802 303 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 ABCB4P21439 1286 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 CD38P28907 300 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 CSKP41240 450 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 DAOAP59103 153 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 BST2Q10589 180 aaKnown RBP13.88□□□□□ -0.19
COMMD4-214ENST00000566230 BNIP3Q12983 259 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 ARID5BQ14865 1188 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 CCDC40Q4G0X9 1142 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 C9orf64Q5T6V5 341 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 HES3Q5TGS1 186 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 TCERG1LQ5VWI1 586 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 NADSYN1Q6IA69 706 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 MMAAQ8IVH4 418 aaKnown RBP13.88□□□□□ -0.19
COMMD4-214ENST00000566230 DHX40Q8IX18 779 aaKnown RBP13.88□□□□□ -0.19
COMMD4-214ENST00000566230 OR2T34Q8NGX1 318 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 FIBINQ8TAL6 211 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 KCTD13Q8WZ19 329 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 FAM129BQ96TA1 746 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 IRX2Q9BZI1 471 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-214ENST00000566230 NRSN2Q9GZP1 204 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 AASDHPPTQ9NRN7 309 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 ABCC13Q9NSE7 274 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 STIM2Q9P246 746 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 AK5Q9Y6K8 562 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 COL6A6A6NMZ7 2263 aa13.88□□□□□ -0.19
COMMD4-214ENST00000566230 TDRD6O60522 2096 aaKnown RBP13.87□□□□□ -0.19
COMMD4-214ENST00000566230 LRRC72A6NJI9 287 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 P4HA2O15460 535 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 RNASEH2AO75792 299 aaKnown RBP13.87□□□□□ -0.19
COMMD4-214ENST00000566230 PTMSP20962 102 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 EPHA8P29322 1005 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-214ENST00000566230 CTSOP43234 321 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-214ENST00000566230 MXI1P50539 228 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 CCR5P51681 352 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 CETN1Q12798 172 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 PKDCCQ504Y2 493 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 SGO2Q562F6 1265 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 FSCBQ5H9T9 825 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 LRRC69Q6ZNQ3 347 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 KANSL1Q7Z3B3 1105 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 SCML4Q8N228 414 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 AADATQ8N5Z0 425 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 SNIP1Q8TAD8 396 aaKnown RBP13.87□□□□□ -0.19
COMMD4-214ENST00000566230 SLC35C1Q96A29 364 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 SKA1Q96BD8 255 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 PRICKLE1Q96MT3 831 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-214ENST00000566230 CNGB3Q9NQW8 809 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 GDF3Q9NR23 364 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 FZD4Q9ULV1 537 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 ERVW-1Q9UQF0 538 aa13.87□□□□□ -0.19
COMMD4-214ENST00000566230 NAV2Q8IVL1 2488 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 TLR4O00206 839 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 O00370 1275 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 IRAK2O43187 625 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 RNASEH1O60930 286 aaKnown RBP13.86□□□□□ -0.19
COMMD4-214ENST00000566230 ASLP04424 464 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 LCP1P13796 627 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 PRKCSHP14314 528 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-214ENST00000566230 PLA2G2AP14555 144 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 SLC8A1P32418 973 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 RXRGP48443 463 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 NXPH1P58417 271 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 ST8SIA6P61647 398 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 RPS24P62847 133 aaKnown RBP13.86□□□□□ -0.19
COMMD4-214ENST00000566230 TPD52L1Q16890 204 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-214ENST00000566230 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-214ENST00000566230 CCDC183Q5T5S1 534 aa13.86□□□□□ -0.19
COMMD4-214ENST00000566230 SFMBT2Q5VUG0 894 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms