RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TBC1D3HP0C7X1 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 XBP1P17861 261 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 ATP5F1P24539 256 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 HOXD12P35452 270 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 IDUAP35475 653 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 GEMIN4P57678 1058 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 MPP1Q00013 466 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 UBE3AQ05086 875 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 DDX10Q13206 875 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TRPC3Q13507 836 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TDGQ13569 410 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 SMAD1Q15797 465 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 CNGA3Q16281 694 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 CC2D1BQ5T0F9 858 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 INTS11Q5TA45 600 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 WDR78Q5VTH9 848 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3GQ6DHY5 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3CQ6IPX1 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 RETSATQ6NUM9 610 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 FAM180BQ6P0A1 224 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 ANKS1BQ7Z6G8 1248 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 LAS2Q8IYD9 372 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3Q8IZP1 549 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 PPHLN1Q8NEY8 458 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 OSR1Q8TAX0 266 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 MAP4K1Q92918 833 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TRMT61AQ96FX7 289 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 P2RY11Q96G91 374 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 RBM17Q96I25 401 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 PPM1MQ96MI6 270 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 ELOVL1Q9BW60 279 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 UBN1Q9NPG3 1134 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 WASH6PQ9NQA3 447 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TMEM160Q9NX00 188 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 MAP3K20Q9NYL2 800 aaKnown RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 ZNF69Q9UC07 566 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 MAFFQ9ULX9 164 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 DERAQ9Y315 318 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 SIRT4Q9Y6E7 314 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 NKX2-8O15522 239 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 KLK10O43240 276 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 KAT7O95251 611 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 TOP3BO95985 862 aaKnown RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 CSF1P09603 554 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 HNRNPA1P09651 372 aaKnown RBP eCLIP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 LYL1P12980 280 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 SLC8A1P32418 973 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 GRK5P34947 590 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 STAT6P42226 847 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 AGTR2P50052 363 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 ZNF84P51523 738 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 NR1H2P55055 460 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 RPL15P61313 204 aaKnown RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 YPEL5P62699 121 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 CFHR1Q03591 330 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 DMWDQ09019 674 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 HNRNPA0Q13151 305 aaKnown RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 MAPK7Q13164 816 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 TRIP6Q15654 476 aaKnown RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 ETFDHQ16134 617 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 SLC9C2Q5TAH2 1124 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 PAPD7Q5XG87 772 aaKnown RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 DGAT2L7PQ6IED9 249 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 RSRC2Q7L4I2 434 aaKnown RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 RFX6Q8HWS3 928 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 CNGA4Q8IV77 575 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 DENND1AQ8TEH3 1009 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 SCARB1Q8WTV0 552 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 SKA1Q96BD8 255 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 ZNF845Q96IR2 970 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 FAR2Q96K12 515 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 REEP2Q9BRK0 252 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 TM2D2Q9BX73 214 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 GPR63Q9BZJ6 419 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 NUAK2Q9H093 628 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 MLXIPLQ9NP71 852 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 ASNSD1Q9NWL6 643 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 TUBA8Q9NY65 449 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-213ENST00000554776 ARHGAP26Q9UNA1 814 aa3.47□□□□□ -1.85
SCFD1-213ENST00000554776 VWA3AA6NCI4 1184 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 MOSPD3O75425 235 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 ACP5P13686 325 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 IGFBP2P18065 325 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 CDK7P50613 346 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 RCAN1P53805 252 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 FOXL2P58012 376 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 TAS2R50P59544 299 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 RBM6P78332 1123 aaKnown RBP3.46□□□□□ -1.86
SCFD1-213ENST00000554776 TLE2Q04725 743 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 TLE3Q04726 772 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 CHRNDQ07001 517 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 CBFBQ13951 182 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 MAPRE1Q15691 268 aaKnown RBP3.46□□□□□ -1.86
SCFD1-213ENST00000554776 PFKFB3Q16875 520 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-213ENST00000554776 Q4G0T1 1027 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 ATG16L1Q676U5 607 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 FSIP1Q8NA03 581 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 PIGOQ8TEQ8 1089 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 ARRDC3Q96B67 414 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 SDCCAG3Q96C92 435 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms