RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 DGCR14Q96DF8 476 aaKnown RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 REXO5Q96IC2 774 aaKnown RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 HPDLQ96IR7 371 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 OSBPL6Q9BZF3 934 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 LRMDAQ9H2I8 198 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 EMC3Q9P0I2 261 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 OR5F1O95221 314 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MAPK1P28482 360 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ATN1P54259 1190 aaPredicted RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 ITGA7Q13683 1181 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 HIST2H2ACQ16777 129 aaPredicted RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 C10orf120Q5SQS8 335 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 HIST2H2AA3Q6FI13 130 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MZT2AQ6P582 158 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ZNF621Q6ZSS3 439 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 TMEM132CQ8N3T6 1108 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 FAM47BQ8NA70 645 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 KCTD4Q8WVF5 259 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 NT5C1AQ9BXI3 368 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ACSS2Q9NR19 701 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 HMGXB3Q12766 1538 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 KBTBD13C9JR72 458 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 TPH1P17752 444 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 PAX3P23760 479 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 OXCT1P55809 520 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 TMEM8AQ9HCN3 771 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 BLOC1S4Q9NUP1 217 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ZNF112Q9UJU3 913 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 INVSQ9Y283 1065 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 AP3D1O14617 1153 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 PSMD3O43242 534 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 CCNFP41002 786 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 SLC5A3P53794 718 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 GSTA3Q16772 222 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 AADACL2Q6P093 401 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ERGIC2Q96RQ1 377 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MED28Q9H204 178 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MARCH7Q9H992 704 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ZNF571Q7Z3V5 609 aaPredicted RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 FAM167AQ96KS9 214 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 TUBE1Q9UJT0 475 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 U3KQV3 271 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ANXA6P08133 673 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MCFD2Q8NI22 146 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 NSUN6Q8TEA1 469 aaKnown RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 PLAGL2Q9UPG8 496 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 TOR1BO14657 336 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 CCR4P51679 360 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 PAGE2BQ5JRK9 111 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 IL27RAQ6UWB1 636 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 GSTCDQ8NEC7 633 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 KBTBD8Q8NFY9 601 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 OTUD5Q96G74 571 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 COX4I1P13073 169 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ACTR8Q9H981 624 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 GGA2Q9UJY4 613 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 FBXO9Q9UK97 447 aaPredicted RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 CHD4Q14839 1912 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 RIPK1Q13546 671 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CRELD2Q6UXH1 353 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 TMEM179Q6ZVK1 233 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 MYDGFQ969H8 173 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CHIAQ9BZP6 476 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 REEP1Q9H902 201 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CRNNQ9UBG3 495 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 GNB5O14775 395 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 MSH3P20585 1137 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 NPEPPSP55786 919 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 SLC22A9Q8IVM8 553 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 ZNF615Q8N8J6 731 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 MECRQ9BV79 373 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CLPBQ9H078 707 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 PNPLA8Q9NP80 782 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 A1CFQ9NQ94 594 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 GMPPBQ9Y5P6 360 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 TTC3P53804 2025 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CAPN8A6NHC0 703 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 TIPRLO75663 272 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 EPN2O95208 641 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 HPGDP15428 266 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 STIP1P31948 543 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 HALP42357 657 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 TIMM50Q3ZCQ8 353 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 MEIOBQ8N635 442 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 SLC5A5Q92911 643 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 MAGEB10Q96LZ2 347 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 ANAPC2Q9UJX6 822 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 SHOC2Q9UQ13 582 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 PCDHGA10Q9Y5H3 936 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 FRG1Q14331 258 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 PKN1Q16512 942 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 C16orf46Q6P387 395 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 PEG10Q86TG7 708 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 TATDN2Q93075 761 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 FICDQ9BVA6 458 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 EPB41L4BQ9H329 900 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 EGFL7Q9UHF1 273 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms