RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gm10801F7C7Q0 168 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ifi206G3UZV2 921 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kbtbd2G3X9X1 623 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Spin2fJ3QPU0 254 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm3402K7N5P2 326 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vmn2r39L7N2E5 861 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Per1O35973 1291 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Top3aO70157 1003 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 AlplP09242 524 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Hoxc6P10629 235 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rfx2P48379 717 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 NcstnP57716 708 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rpl22P67984 128 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Sema3cQ62181 751 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Nqo1Q64669 274 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gpsm1Q6IR34 673 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ccdc117Q6PB51 277 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Trpm4Q7TN37 1213 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam181bQ80VF6 417 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pcsk9Q80W65 694 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam163bQ8BUM6 167 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Galnt5Q8C102 930 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ano4Q8C5H1 955 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fbxw7Q8VBV4 629 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Uroc1Q8VC12 676 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lrp8Q924X6 996 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Sytl2Q99N50 950 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Abcb9Q9JJ59 762 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Scube2Q9JJS0 997 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fzd9Q9R216 592 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 PfkpQ9WUA3 784 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Shcbp1Q9Z179 668 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mageb4A2A9R3 556 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Prpmp5E9PXN1 296 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pbx3O35317 434 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cyp2c38P56655 490 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 PrkczQ02956 592 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Alkbh5Q3TSG4 395 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Serac1Q3U213 654 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pik3r6Q3U6Q4 756 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q3UE31 404 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pitpnm3Q3UHE1 974 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rbl2Q64700 1135 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 MregQ6NVG5 214 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dusp11Q6NXK5 321 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cfap206Q6PE87 622 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr412Q7TRW7 312 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr301Q7TS04 311 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Armc12Q80X86 340 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 PudpQ9D5U5 234 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 NvlQ9DBY8 855 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm27029A2A4P4 543 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cyp2a22B2RXZ2 492 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vmn2r1O70410 912 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cyp2a4P15392 494 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cyp2a5P20852 494 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 LynP25911 512 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Timm13P62075 95 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Parp3Q3ULW8 533 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Afap1l2Q5DTU0 825 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Phlda1Q62392 405 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Galnt10Q6P9S7 603 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Trub1Q8C0D0 338 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dis3lQ8C0S1 1053 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 ClyblQ8R4N0 338 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr615Q8VGY4 313 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 CygbQ9CX80 190 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 PignQ9R1S3 931 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 LipaQ9Z0M5 397 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 CitP49025 2055 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Zfp626A0A0U1RQ84 676 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pcdh9F8VPK8 1237 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slc2a4P14142 509 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 CblP22682 913 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vps4bP46467 444 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Hsd17b2P51658 381 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cyp2c65Q148B1 490 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Phactr1Q2M3X8 580 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lrfn1Q2WF71 766 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam71bQ5STT6 665 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Exoc3l4Q6DIA2 721 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr297Q7TS07 310 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tmem74Q8BQU7 305 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tmtc3Q8BRH0 920 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q8CCC3 530 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 CopaQ8CIE6 1224 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tbc1d13Q8R3D1 400 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vangl2Q91ZD4 521 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Zcchc12Q9CZA5 402 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tmed10Q9D1D4 219 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cyp4f14Q9EP75 524 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mgea5Q9EQQ9 916 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Clcn2Q9R0A1 908 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lcn6A2AJB9 181 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kctd18E0CZ26 429 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rgs2O08849 211 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Phkg1P07934 388 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Msr1P30204 458 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kpna2P52293 529 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gata5P97489 404 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms