Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Gm25239-201ENSMUST00000174915 86 ntBASIC31,75■■■□□ 2,67
Lrfn1Q2WF71 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Lrfn1Q2WF71 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Lrfn1Q2WF71 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Lrfn1Q2WF71 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29,29■■■□□ 2,28
Lrfn1Q2WF71 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,22
Lrfn1Q2WF71 Psd-208ENSMUST00000224556 2034 ntBASIC28,69■■■□□ 2,18
Lrfn1Q2WF71 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,68■■■□□ 2,18
Lrfn1Q2WF71 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Lrfn1Q2WF71 Gm15042-201ENSMUST00000120212 883 ntBASIC27,87■■■□□ 2,05
Lrfn1Q2WF71 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,67■■■□□ 2,02
Lrfn1Q2WF71 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,66■■■□□ 2,02
Lrfn1Q2WF71 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
Lrfn1Q2WF71 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27,6■■■□□ 2,01
Lrfn1Q2WF71 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27,52■■■□□ 2
Lrfn1Q2WF71 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27,52■■■□□ 2
Lrfn1Q2WF71 Gm24109-201ENSMUST00000175489 103 ntBASIC27,44■■□□□ 1,98
Lrfn1Q2WF71 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,37■■□□□ 1,97
Lrfn1Q2WF71 Gm15045-201ENSMUST00000117359 883 ntBASIC27,3■■□□□ 1,96
Lrfn1Q2WF71 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Lrfn1Q2WF71 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,24■■□□□ 1,95
Lrfn1Q2WF71 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27,02■■□□□ 1,92
Lrfn1Q2WF71 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1,91
Lrfn1Q2WF71 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
Lrfn1Q2WF71 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,88■■□□□ 1,89
Lrfn1Q2WF71 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,78■■□□□ 1,88
Lrfn1Q2WF71 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,75■■□□□ 1,87
Lrfn1Q2WF71 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Lrfn1Q2WF71 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,71■■□□□ 1,87
Lrfn1Q2WF71 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,66■■□□□ 1,86
Lrfn1Q2WF71 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,56■■□□□ 1,84
Lrfn1Q2WF71 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Lrfn1Q2WF71 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Lrfn1Q2WF71 Gm23366-201ENSMUST00000175022 89 ntBASIC26,52■■□□□ 1,84
Lrfn1Q2WF71 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26,48■■□□□ 1,83
Lrfn1Q2WF71 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Lrfn1Q2WF71 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Lrfn1Q2WF71 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26,36■■□□□ 1,81
Lrfn1Q2WF71 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,35■■□□□ 1,81
Lrfn1Q2WF71 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26,28■■□□□ 1,8
Lrfn1Q2WF71 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,17■■□□□ 1,78
Lrfn1Q2WF71 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,01■■□□□ 1,75
Lrfn1Q2WF71 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Lrfn1Q2WF71 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Lrfn1Q2WF71 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Lrfn1Q2WF71 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,9■■□□□ 1,74
Lrfn1Q2WF71 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,73
Lrfn1Q2WF71 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Lrfn1Q2WF71 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25,8■■□□□ 1,72
Lrfn1Q2WF71 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,79■■□□□ 1,72
Lrfn1Q2WF71 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Lrfn1Q2WF71 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,74■■□□□ 1,71
Lrfn1Q2WF71 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25,73■■□□□ 1,71
Lrfn1Q2WF71 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,72■■□□□ 1,71
Lrfn1Q2WF71 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,71■■□□□ 1,71
Lrfn1Q2WF71 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25,71■■□□□ 1,71
Lrfn1Q2WF71 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,7■■□□□ 1,7
Lrfn1Q2WF71 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Lrfn1Q2WF71 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,62■■□□□ 1,69
Lrfn1Q2WF71 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,61■■□□□ 1,69
Lrfn1Q2WF71 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Lrfn1Q2WF71 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,56■■□□□ 1,68
Lrfn1Q2WF71 Zxda-201ENSMUST00000117281 2621 ntBASIC25,55■■□□□ 1,68
Lrfn1Q2WF71 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25,55■■□□□ 1,68
Lrfn1Q2WF71 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Lrfn1Q2WF71 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Lrfn1Q2WF71 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,53■■□□□ 1,68
Lrfn1Q2WF71 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,5■■□□□ 1,67
Lrfn1Q2WF71 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Lrfn1Q2WF71 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,48■■□□□ 1,67
Lrfn1Q2WF71 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,42■■□□□ 1,66
Lrfn1Q2WF71 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25,34■■□□□ 1,65
Lrfn1Q2WF71 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Lrfn1Q2WF71 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25,24■■□□□ 1,63
Lrfn1Q2WF71 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25,22■■□□□ 1,63
Lrfn1Q2WF71 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,16■■□□□ 1,62
Lrfn1Q2WF71 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,15■■□□□ 1,62
Lrfn1Q2WF71 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,15■■□□□ 1,62
Lrfn1Q2WF71 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,61
Lrfn1Q2WF71 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Lrfn1Q2WF71 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Lrfn1Q2WF71 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
Lrfn1Q2WF71 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Lrfn1Q2WF71 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,06■■□□□ 1,6
Lrfn1Q2WF71 Gm25238-201ENSMUST00000174914 89 ntBASIC25,03■■□□□ 1,6
Lrfn1Q2WF71 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25,01■■□□□ 1,59
Lrfn1Q2WF71 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
Lrfn1Q2WF71 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,98■■□□□ 1,59
Lrfn1Q2WF71 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24,97■■□□□ 1,59
Lrfn1Q2WF71 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Lrfn1Q2WF71 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Lrfn1Q2WF71 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24,97■■□□□ 1,59
Lrfn1Q2WF71 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24,96■■□□□ 1,59
Lrfn1Q2WF71 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,95■■□□□ 1,58
Lrfn1Q2WF71 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24,94■■□□□ 1,58
Lrfn1Q2WF71 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Lrfn1Q2WF71 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Lrfn1Q2WF71 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24,88■■□□□ 1,57
Lrfn1Q2WF71 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24,87■■□□□ 1,57
Lrfn1Q2WF71 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24,79■■□□□ 1,56
Retrieved 100 of 76,532 protein–RNA pairs in 40,2 ms