Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Gm25239-201ENSMUST00000174915 86 ntBASIC31.75■■■□□ 2.67
Lrfn1Q2WF71 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Lrfn1Q2WF71 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Lrfn1Q2WF71 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Lrfn1Q2WF71 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Lrfn1Q2WF71 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Lrfn1Q2WF71 Psd-208ENSMUST00000224556 2034 ntBASIC28.69■■■□□ 2.18
Lrfn1Q2WF71 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Lrfn1Q2WF71 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Lrfn1Q2WF71 Gm15042-201ENSMUST00000120212 883 ntBASIC27.87■■■□□ 2.05
Lrfn1Q2WF71 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Lrfn1Q2WF71 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Lrfn1Q2WF71 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Lrfn1Q2WF71 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Lrfn1Q2WF71 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Lrfn1Q2WF71 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.52■■■□□ 2
Lrfn1Q2WF71 Gm24109-201ENSMUST00000175489 103 ntBASIC27.44■■□□□ 1.98
Lrfn1Q2WF71 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Lrfn1Q2WF71 Gm15045-201ENSMUST00000117359 883 ntBASIC27.3■■□□□ 1.96
Lrfn1Q2WF71 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Lrfn1Q2WF71 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Lrfn1Q2WF71 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Lrfn1Q2WF71 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Lrfn1Q2WF71 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Lrfn1Q2WF71 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Lrfn1Q2WF71 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Lrfn1Q2WF71 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.75■■□□□ 1.87
Lrfn1Q2WF71 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Lrfn1Q2WF71 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Lrfn1Q2WF71 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lrfn1Q2WF71 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Lrfn1Q2WF71 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Lrfn1Q2WF71 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Lrfn1Q2WF71 Gm23366-201ENSMUST00000175022 89 ntBASIC26.52■■□□□ 1.84
Lrfn1Q2WF71 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Lrfn1Q2WF71 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lrfn1Q2WF71 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lrfn1Q2WF71 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.36■■□□□ 1.81
Lrfn1Q2WF71 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lrfn1Q2WF71 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Lrfn1Q2WF71 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.17■■□□□ 1.78
Lrfn1Q2WF71 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Lrfn1Q2WF71 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lrfn1Q2WF71 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Lrfn1Q2WF71 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lrfn1Q2WF71 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lrfn1Q2WF71 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Lrfn1Q2WF71 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lrfn1Q2WF71 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
Lrfn1Q2WF71 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Lrfn1Q2WF71 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Lrfn1Q2WF71 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Lrfn1Q2WF71 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.73■■□□□ 1.71
Lrfn1Q2WF71 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lrfn1Q2WF71 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Lrfn1Q2WF71 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.71■■□□□ 1.71
Lrfn1Q2WF71 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
Lrfn1Q2WF71 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Lrfn1Q2WF71 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lrfn1Q2WF71 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.61■■□□□ 1.69
Lrfn1Q2WF71 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Lrfn1Q2WF71 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Lrfn1Q2WF71 Zxda-201ENSMUST00000117281 2621 ntBASIC25.55■■□□□ 1.68
Lrfn1Q2WF71 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.55■■□□□ 1.68
Lrfn1Q2WF71 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Lrfn1Q2WF71 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lrfn1Q2WF71 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.53■■□□□ 1.68
Lrfn1Q2WF71 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Lrfn1Q2WF71 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Lrfn1Q2WF71 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lrfn1Q2WF71 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.42■■□□□ 1.66
Lrfn1Q2WF71 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Lrfn1Q2WF71 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Lrfn1Q2WF71 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lrfn1Q2WF71 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
Lrfn1Q2WF71 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.16■■□□□ 1.62
Lrfn1Q2WF71 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Lrfn1Q2WF71 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Lrfn1Q2WF71 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Lrfn1Q2WF71 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lrfn1Q2WF71 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Lrfn1Q2WF71 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Lrfn1Q2WF71 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lrfn1Q2WF71 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.06■■□□□ 1.6
Lrfn1Q2WF71 Gm25238-201ENSMUST00000174914 89 ntBASIC25.03■■□□□ 1.6
Lrfn1Q2WF71 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lrfn1Q2WF71 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Lrfn1Q2WF71 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.98■■□□□ 1.59
Lrfn1Q2WF71 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Lrfn1Q2WF71 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lrfn1Q2WF71 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lrfn1Q2WF71 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Lrfn1Q2WF71 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Lrfn1Q2WF71 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.95■■□□□ 1.58
Lrfn1Q2WF71 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Lrfn1Q2WF71 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Lrfn1Q2WF71 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrfn1Q2WF71 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Lrfn1Q2WF71 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Lrfn1Q2WF71 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms