RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 IGHMBP2P38935 993 aaKnown RBP4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 JAK3P52333 1124 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ACTR2P61160 394 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 BFSP2Q13515 415 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 SLC12A1Q13621 1099 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 MEA1Q16626 185 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 BTBD16Q32M84 506 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 SPECC1Q5M775 1068 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ARMC3Q5W041 872 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 RINT1Q6NUQ1 792 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 DCDC5Q6ZRR9 648 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ANKRD23Q86SG2 305 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 TTC30AQ86WT1 665 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 CHSY1Q86X52 802 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 FAM71DQ8N9W8 422 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ANKRD52Q8NB46 1076 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 SEMA6DQ8NFY4 1073 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 OR52L2PQ8NGH6 319 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 SCAMP5Q8TAC9 235 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 HASPINQ8TF76 798 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 WDR60Q8WVS4 1066 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 GLMPQ8WWB7 406 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 DPF1Q92782 380 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 HVCN1Q96D96 273 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZG16BQ96DA0 208 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 C7orf26Q96N11 449 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 FYTTD1Q96QD9 318 aaKnown RBP4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 RNF26Q9BY78 433 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 AGXT2Q9BYV1 514 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 LMAN2LQ9H0V9 348 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 RSPH9Q9H1X1 276 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 USP29Q9HBJ7 922 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ANKEF1Q9NU02 776 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 NSMCE4AQ9NXX6 385 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 C11orf21Q9P2W6 132 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 NFU1Q9UMS0 254 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ARHGAP26Q9UNA1 814 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 GPR34Q9UPC5 381 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZBTB1Q9Y2K1 713 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 PCDHB2Q9Y5E7 798 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 SPATA31A6Q5VVP1 1343 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 PGPEP1LA6NFU8 196 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 C16orf96A6NNT2 1141 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 M0QYT0 321 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 CLIC1O00299 241 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 FYB1O15117 783 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 NKX2-8O15522 239 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 PLOD3O60568 738 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 TIPRLO75663 272 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 C1RP00736 705 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 TK1P04183 234 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 VDRP11473 427 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 SFPQP23246 707 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 HOXD12P35452 270 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 AARSP49588 968 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 DRG2P55039 364 aaKnown RBP4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 CASP6P55212 293 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 AP2B1P63010 937 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 CHRNDQ07001 517 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 KRT32Q14532 448 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 C1QTNF12Q5T7M4 302 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 TTC22Q5TAA0 569 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 PRAMEF17Q5VTA0 474 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 FAM205BPQ63HN1 556 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 LSMEM1Q8N8F7 131 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 NELL1Q92832 810 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 SDCCAG3Q96C92 435 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 HIC2Q96JB3 615 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 SDF4Q9BRK5 362 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 GATA5Q9BWX5 397 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 TAF1DQ9H5J8 278 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 NKIRAS2Q9NYR9 191 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 TFCP2L1Q9NZI6 479 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 ORC3Q9UBD5 711 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 DAPP1Q9UN19 280 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 PCDHB7Q9Y5E2 793 aa4.94□□□□□ -1.62
HMGB1P48-201ENST00000446155 SLC38A8A6NNN8 435 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 KIF28PB7ZC32 967 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 SMIM22K7EJ46 135 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 USO1O60763 962 aaKnown RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 RTN3O95197 1032 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 RPN1P04843 607 aaKnown RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 RXRAP19793 462 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 AKT1P31749 480 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 KRT20P35900 424 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 FAM3BP58499 235 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 WDR5P61964 334 aaKnown RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 TUBA4AP68366 448 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 SLC14A1Q13336 389 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 GAB1Q13480 694 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 KCNB1Q14721 858 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 MFSD13AQ14CX5 517 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 AAK1Q2M2I8 961 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 AWAT1Q58HT5 328 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 MAP3K21Q5TCX8 1036 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 NFRKBQ6P4R8 1299 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 KYAT3Q6YP21 454 aaKnown RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZNF782Q6ZMW2 699 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 PTF1AQ7RTS3 328 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms