RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MOCS1Q9NZB8 636 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PPARGC1AQ9UBK2 798 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 HEY2Q9UBP5 337 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 HERC5Q9UII4 1024 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SPATA2Q9UM82 520 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AP3M1Q9Y2T2 418 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 IPPQ9Y573 584 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SNX8Q9Y5X2 465 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SNCAIPQ9Y6H5 919 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 HTTP42858 3142 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PIEZO2Q9H5I5 2752 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CHD4Q14839 1912 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 VPS13AQ96RL7 3174 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 KLF18A0A0U1RQI7 1052 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MYOCOSA0A1B0GUC4 107 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CAPN8A6NHC0 703 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TRPC5OSA6NMA1 111 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 VWA5AO00534 786 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 POLR1CO15160 346 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 THAP12O43422 761 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PPP6R2O75170 966 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DNAJB5O75953 348 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 OR7A10O76100 309 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 EYA4O95677 639 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CCNYL3P0C7X3 344 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CDH1P12830 882 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PON1P27169 355 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PEX2P28328 305 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FDFT1P37268 417 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZAP70P43403 619 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NR2C2P49116 596 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ETV1P50549 477 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 MYL6P60660 151 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PRAMEP78395 509 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PRKCQQ04759 706 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 BNIP3Q12983 259 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 PLD1Q13393 1074 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FLOT2Q14254 428 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 COG2Q14746 738 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 C5orf22Q49AR2 442 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 RBM20Q5T481 1227 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 PPP1R26Q5T8A7 1209 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 METTL11BQ5VVY1 283 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 GALNT18Q6P9A2 607 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 GPR142Q7Z601 462 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 FBXO16Q8IX29 292 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZCCHC7Q8N3Z6 543 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 GOT1L1Q8NHS2 421 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 VANGL1Q8TAA9 524 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SCFD2Q8WU76 684 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CHPT1Q8WUD6 406 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SCFD1Q8WVM8 642 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SLC7A6OSQ96CW6 309 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 CCDC120Q96HB5 630 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 VPS39Q96JC1 886 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 TMEM87BQ96K49 555 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 BIRC8Q96P09 236 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CDADC1Q9BWV3 514 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 OSBPL8Q9BZF1 889 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 SLITRK6Q9H5Y7 841 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CYP4F11Q9HBI6 524 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 HMG20AQ9NP66 347 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DIABLOQ9NR28 239 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AGPAT5Q9NUQ2 364 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 DDX43Q9NXZ2 648 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 PKD2L2Q9NZM6 624 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 VPS54Q9P1Q0 977 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 IGSF9Q9P2J2 1179 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 ARPP21Q9UBL0 812 aaPredicted RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 LIMD1Q9UGP4 676 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 LIMA1Q9UHB6 759 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 ZNHIT2Q9UHR6 403 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 CDV3Q9UKY7 258 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SLC45A1Q9Y2W3 748 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NOC2LQ9Y3T9 749 aaKnown RBP2.85□□□□□ -1.95
LIG4-203ENST00000442234 SNX13Q9Y5W8 968 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 NFS1Q9Y697 457 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 AP4B1Q9Y6B7 739 aa2.85□□□□□ -1.95
LIG4-203ENST00000442234 COL18A1P39060 1754 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 EMSYQ7Z589 1322 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 MYH7BA7E2Y1 1941 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 TRAV6A0A075B6T7 132 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 A0A1W2PRG6 482 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 MEN1O00255 615 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 CLOCKO15516 846 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PRKAB2O43741 272 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PEX1O43933 1283 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 KPNA6O60684 536 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 NOS1APO75052 506 aaPredicted RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 NDUFS2O75306 463 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 CFBP00751 764 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 ASNSP08243 561 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 FCER1AP12319 257 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 NDUFV2P19404 249 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 ABCB4P21439 1286 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 GNL1P36915 607 aaPredicted RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 PBX3P40426 434 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 CAPZA2P47755 286 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 HK2P52789 917 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 VBP1P61758 197 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms