RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 ADHFE1Q8IWW8 467 aa4.99□□□□□ -1.61
PTPRD-203ENST00000381196 TBC1D21Q8IYX1 336 aa4.99□□□□□ -1.61
PTPRD-203ENST00000381196 RORBQ92753 470 aa4.99□□□□□ -1.61
PTPRD-203ENST00000381196 TMEM121Q9BTD3 319 aa4.99□□□□□ -1.61
PTPRD-203ENST00000381196 ACSS3Q9H6R3 686 aa4.99□□□□□ -1.61
PTPRD-203ENST00000381196 PCDHB7Q9Y5E2 793 aa4.99□□□□□ -1.61
PTPRD-203ENST00000381196 MN1Q10571 1320 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-203ENST00000381196 ZBTB5O15062 677 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PHGDHO43175 533 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ASLP04424 464 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 POLBP06746 335 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 NFKB1P19838 968 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ALDH7A1P49419 539 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 POU5F1Q01860 360 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PRKCQQ04759 706 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PDIA2Q13087 525 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 MMRN1Q13201 1228 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 GTF2H3Q13889 308 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PDK3Q15120 406 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 FAM189A2Q15884 450 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PITRM1Q5JRX3 1037 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 CDCA2Q69YH5 1023 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 C9orf43Q8TAL5 461 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 KIFC1Q9BW19 673 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 KLHL25Q9H0H3 589 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ADAMTS10Q9H324 1103 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 LY9Q9HBG7 655 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 TCF7L2Q9NQB0 619 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 C3orf18Q9UK00 162 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 LRP5O75197 1615 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 RIPK2O43353 540 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 UGT2B11O75310 529 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PRKAR1AP10644 381 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 CCNHP51946 323 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 GCNT1Q02742 428 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 SPCS2Q15005 226 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PDK1Q15118 436 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 FAM98BQ52LJ0 330 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ARMC4Q5T2S8 1044 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 C16orf62Q7Z3J2 963 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 CPNE1Q99829 537 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 CD248Q9HCU0 757 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 SELENONQ9NZV5 590 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PCDHB2Q9Y5E7 798 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ARPC4-TTLL3A0A0A6YYG9 625 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 CCDC182A6NF36 153 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 CRABP2P29373 138 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 CLK1P49759 484 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PSMD4P55036 377 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PSMC5P62195 406 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 TTLL11Q8NHH1 800 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 SLC26A7Q8TE54 656 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 FKBP10Q96AY3 582 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 HOPXQ9BPY8 73 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 DPH5Q9H2P9 285 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 MYOZ2Q9NPC6 264 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 COMMD8Q9NX08 183 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ZDHHC7Q9NXF8 308 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 TNFRSF10DQ9UBN6 386 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 FAM196BA6NMK8 535 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PPP1R3GB7ZBB8 358 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 UBOX5O94941 541 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ITGAXP20702 1163 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF45Q02386 682 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PTGR1Q14914 329 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 MAP1SQ66K74 1059 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 NEK5Q6P3R8 708 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 KIAA0408Q6ZU52 694 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 LRRC8DQ7L1W4 858 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 FAM45AQ8TCE6 357 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 MED30Q96HR3 178 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 TWNKQ96RR1 684 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 FICDQ9BVA6 458 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 RNF208Q9H0X6 261 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 EIF2B3Q9NR50 452 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PCMTD2Q9NV79 361 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 TMEM216Q9P0N5 145 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PCDHB8Q9UN66 801 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 NDUFAF1Q9Y375 327 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 FLT1P17948 1338 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 SUPT3HO75486 399 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ZMYND10O75800 440 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 MLNP12872 115 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ITIH1P19827 911 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 GNG2P59768 71 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 GMFBP60983 142 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 ACTR3P61158 418 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 SCN7AQ01118 1682 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 TNK2Q07912 1038 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PTPAQ15257 358 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 C1orf167Q5SNV9 1468 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 C12orf60Q5U649 245 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PRR5LQ6MZQ0 368 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 NCCRP1Q6ZVX7 275 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 PSTKQ8IV42 348 aaKnown RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 OR7A2PQ8NGA2 310 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 TCF12Q99081 682 aa4.98□□□□□ -1.61
PTPRD-203ENST00000381196 POLR3FQ9H1D9 316 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 RCOR3Q9P2K3 495 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-203ENST00000381196 SH3BP1Q9Y3L3 701 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms