RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 LRRC39Q96DD0 335 aa9.99□□□□□ -0.81
TRIM23-201ENST00000231524 SYT11Q9BT88 431 aa9.99□□□□□ -0.81
TRIM23-201ENST00000231524 C17orf75Q9HAS0 396 aa9.99□□□□□ -0.81
TRIM23-201ENST00000231524 KCPQ6ZWJ8 1503 aa9.99□□□□□ -0.81
TRIM23-201ENST00000231524 COL1A1P02452 1464 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 H3BNX3 289 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 J3QRK9 145 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 AP3B1O00203 1094 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 MRASO14807 208 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 HDAC3O15379 428 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 VAPBO95292 243 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CSH1P0DML2 217 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CSH2P0DML3 217 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 MAGEA10P43363 369 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CDH8P55286 799 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 SPIDRQ14159 915 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 C15orf59Q2T9L4 293 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 FUT11Q495W5 492 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CAMK1DQ8IU85 385 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 FBXL8Q96CD0 374 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 FAM163AQ96GL9 167 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CGRRF1Q99675 332 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 C1orf50Q9BV19 199 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 DGCR6LQ9BY27 220 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 KCNK13Q9HB14 408 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 KANSL3Q9P2N6 904 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CROTQ9UKG9 612 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 SQORQ9Y6N5 450 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 DYTNA2CJ06 578 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 NFIBO00712 420 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 UBDO15205 165 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 INPP4BO15327 924 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CCNT2O60583 730 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 USP12O75317 370 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 GCAP28676 217 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 INHBCP55103 352 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 DAB2P98082 770 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 YWHAHQ04917 246 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 SLC18A2Q05940 514 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 NME3Q13232 169 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 INAQ16352 499 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 PDCD4Q53EL6 469 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 XKR3Q5GH77 459 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 C6orf183Q5T699 404 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 TMC5Q6UXY8 1006 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CCDC81Q6ZN84 652 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CCDC103Q8IW40 242 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 COLGALT1Q8NBJ5 622 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 RNF149Q8NC42 400 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 SLC35B2Q8TB61 432 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 TFB1MQ8WVM0 346 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 LRTOMTQ8WZ04 291 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 SEPHS2Q99611 448 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 PIF1Q9H611 641 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 JPH1Q9HDC5 661 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 IARS2Q9NSE4 1012 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 STX16-NPEPL1H3BU86 382 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 TRIM38O00635 465 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 KLF11O14901 512 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 DNAJA2O60884 412 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CNOT3O75175 753 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 LCP1P13796 627 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CCNA2P20248 432 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 NFKBIAP25963 317 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 TTKP33981 857 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 PTGER2P43116 358 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CSE1LP55060 971 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 RALGDSQ12967 914 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 FASTKQ14296 549 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 TCEAL1Q15170 157 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 DCAF15Q66K64 600 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 KCNT2Q6UVM3 1135 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 C4orf22Q6V702 233 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 ADGRG6Q86SQ4 1221 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 PLD3Q8IV08 490 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 OR5B17Q8NGF7 314 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 MAGEE2Q8TD90 523 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 GLMNQ92990 594 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 PRICKLE1Q96MT3 831 aaPredicted RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 PKP2Q99959 881 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 CDH19Q9H159 772 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 EML4Q9HC35 981 aaKnown RBP9.98□□□□□ -0.81
TRIM23-201ENST00000231524 ZNF302Q9NR11 478 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 SLC8A2Q9UPR5 921 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 TELO2Q9Y4R8 837 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 MYH3P11055 1940 aa9.98□□□□□ -0.81
TRIM23-201ENST00000231524 ALS2Q96Q42 1657 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 RBM47A0AV96 593 aaKnown RBP9.97□□□□□ -0.81
TRIM23-201ENST00000231524 SIGLEC16A6NMB1 481 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 PLIN3O60664 434 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 LRCH4O75427 683 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 APOA1P02647 267 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 CKMT2P17540 419 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 HHIPL2Q6UWX4 724 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 HERC6Q8IVU3 1022 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 ZNF781Q8N8C0 355 aa9.97□□□□□ -0.81
TRIM23-201ENST00000231524 MKL1Q969V6 931 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms