RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 PTPRQQ9UMZ3 2332 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 LRRC72A6NJI9 287 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 IKBKBO14920 756 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 BRINP1O60477 761 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 RNASEH1O60930 286 aaKnown RBP12.82□□□□□ -0.36
TOP3A-215ENST00000583328 CD38P28907 300 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 AFMP43652 599 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 ZNF445P59923 1031 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 SLC9A9Q8IVB4 645 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 FMNL3Q8IVF7 1028 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.82□□□□□ -0.36
TOP3A-215ENST00000583328 TSC1Q92574 1164 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 UBXN6Q9BZV1 441 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 SCAND2PQ9GZW5 306 aaPredicted RBP12.82□□□□□ -0.36
TOP3A-215ENST00000583328 NEUROG2Q9H2A3 272 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 EBF2Q9HAK2 575 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 MAGEF1Q9HAY2 307 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 APOBEC3GQ9HC16 384 aaKnown RBP12.82□□□□□ -0.36
TOP3A-215ENST00000583328 SCML1Q9UN30 329 aa12.82□□□□□ -0.36
TOP3A-215ENST00000583328 A0A1W2PP55 124 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 POLR2DO15514 142 aaKnown RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 CUTAO60888 179 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 GLDCP23378 1020 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 EPHA8P29322 1005 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 ARRB1P49407 418 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 SLC8A3P57103 927 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 ST8SIA6P61647 398 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 TLE3Q04726 772 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 BNIP3Q12983 259 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 ILKQ13418 452 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 SLC45A4Q5BKX6 768 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 KIAA0907Q7Z7F0 614 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 PIGZQ86VD9 579 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 SPACA3Q8IXA5 215 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 RNF139Q8WU17 664 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 OMDQ99983 421 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 NIF3L1Q9GZT8 377 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 RSPH9Q9H1X1 276 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 MTG2Q9H4K7 406 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 OLA1Q9NTK5 396 aaKnown RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 SFMBT1Q9UHJ3 866 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 CLCA2Q9UQC9 943 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 FRMD4BQ9Y2L6 1034 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 HBS1LQ9Y450 684 aaKnown RBP12.81□□□□□ -0.36
TOP3A-215ENST00000583328 CKAP5Q14008 2032 aa12.81□□□□□ -0.36
TOP3A-215ENST00000583328 MYH10P35580 1976 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 ZNF462Q96JM2 2506 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 A0A1W2PR77 199 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 ERVH48-1M5A8F1 160 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 MID1O15344 667 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 TBL1XO60907 577 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 SIN3BO75182 1162 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 RNASEH2AO75792 299 aaKnown RBP12.8□□□□□ -0.36
TOP3A-215ENST00000583328 ZBED1O96006 694 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 NR3C1P04150 777 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 SLFN14P0C7P3 912 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 CKMT2P17540 419 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 CD70P32970 193 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 ME1P48163 572 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 VAMP7P51809 220 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 TKTL1P51854 596 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 KCNH2Q12809 1159 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 CUL4BQ13620 913 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 TBC1D25Q3MII6 688 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 ADGRF1Q5T601 910 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 PCSK4Q6UW60 755 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
TOP3A-215ENST00000583328 CACTIN-AS1Q8N1I8 211 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 OR2T34Q8NGX1 318 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 TAS1R2Q8TE23 839 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 NDRG1Q92597 394 aaKnown RBP12.8□□□□□ -0.36
TOP3A-215ENST00000583328 NAF1Q96HR8 494 aaKnown RBP12.8□□□□□ -0.36
TOP3A-215ENST00000583328 SERAC1Q96JX3 654 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 LGMNQ99538 433 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 ULBP1Q9BZM6 244 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 SERGEFQ9UGK8 458 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 STOML2Q9UJZ1 356 aa12.8□□□□□ -0.36
TOP3A-215ENST00000583328 TLR4O00206 839 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 WNT9AO14904 365 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 LATS1O95835 1130 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 RXRGP48443 463 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 GCLMP48507 274 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 CCR5P51681 352 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 SGSHP51688 502 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 STK4Q13043 487 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 CST6Q15828 149 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 RAB41Q5JT25 222 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 C1orf220Q5T0J3 134 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 BROXQ5VW32 411 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 PM20D1Q6GTS8 502 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 SHC4Q6S5L8 630 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 KDM7AQ6ZMT4 941 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms