RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CROCCQ5TZA2 2017 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 PTPRJQ12913 1337 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 PRAMEF33A0A0G2JMD5 474 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 KPNA7A9QM74 516 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 K7ELQ4 463 aaPredicted RBP7.28□□□□□ -1.24
CHD3-213ENST00000571249 NKX2-8O15522 239 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 COCHO43405 550 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 PRAMEF10O60809 474 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 FAM155BO75949 473 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 C4BPAP04003 597 aaKnown RBP7.28□□□□□ -1.24
CHD3-213ENST00000571249 IFNAR1P17181 557 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 SLC6A4P31645 630 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 MAGEA11P43364 429 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 GALCP54803 685 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 TAF10Q12962 218 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 ZNF234Q14588 700 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 NECTIN1Q15223 517 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 ENOX2Q16206 610 aaKnown RBP7.28□□□□□ -1.24
CHD3-213ENST00000571249 CALCRLQ16602 461 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 GEN1Q17RS7 908 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 SMTNL2Q2TAL5 461 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 TSGA10IPQ3SY00 556 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 HS1BP3Q53T59 392 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 OXLD1Q5BKU9 147 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 GALNT17Q6IS24 598 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 GUSBP11Q6P575 273 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 NCEH1Q6PIU2 408 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 ZNF662Q6ZS27 426 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 PIK3AP1Q6ZUJ8 805 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 B3GNT8Q7Z7M8 397 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 DTX1Q86Y01 620 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 PDCL2Q8N4E4 241 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 UCMAQ8WVF2 138 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 FUBP3Q96I24 572 aaKnown RBP eCLIP7.28□□□□□ -1.24
CHD3-213ENST00000571249 SERAC1Q96JX3 654 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 HEXIM2Q96MH2 286 aaKnown RBP7.28□□□□□ -1.24
CHD3-213ENST00000571249 TSPAN18Q96SJ8 248 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 TTLL2Q9BWV7 592 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 CCSER1Q9C0I3 900 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 GSX1Q9H4S2 264 aaPredicted RBP7.28□□□□□ -1.24
CHD3-213ENST00000571249 TUFT1Q9NNX1 390 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 CHMP5Q9NZZ3 219 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 MARK1Q9P0L2 795 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 MAP10Q9P2G4 905 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 SERGEFQ9UGK8 458 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 KCNJ14Q9UNX9 436 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 SNX14Q9Y5W7 946 aa7.28□□□□□ -1.24
CHD3-213ENST00000571249 NSD1Q96L73 2696 aaPredicted RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 EFCAB7A8K855 629 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 SLC16A4O15374 487 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 NVLO15381 856 aaKnown RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 HCRTO43612 131 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 NEBLO76041 1014 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 CD2BP2O95400 341 aaKnown RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 DNTTP04053 509 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 ITIH1P19827 911 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 ANXA13P27216 316 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 ADRA1BP35368 520 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 RPS14P62263 151 aaKnown RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 IFRD2Q12894 506 aaPredicted RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 STRN3Q13033 797 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 NFKBIBQ15653 356 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 SLC45A4Q5BKX6 768 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 PERM1Q5SV97 790 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 TDRD10Q5VZ19 366 aaKnown RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 RAB11FIP2Q7L804 512 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 EFL1Q7Z2Z2 1120 aaKnown RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 SPATA3Q8NHX4 192 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 AIFM3Q96NN9 605 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 CITED4Q96RK1 184 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 DUSP9Q99956 384 aaKnown RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 FOXP3Q9BZS1 431 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 GJB4Q9NTQ9 266 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 EHD2Q9NZN4 543 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 MAGEC2Q9UBF1 373 aaPredicted RBP7.27□□□□□ -1.25
CHD3-213ENST00000571249 PISDQ9UG56 409 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 CA5BQ9Y2D0 317 aa7.27□□□□□ -1.25
CHD3-213ENST00000571249 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.26□□□□□ -1.25
CHD3-213ENST00000571249 HAX1O00165 279 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 WIPF1O43516 503 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 DUX1O43812 170 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 ATP2C2O75185 946 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 ADRB2P07550 413 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 BDNFP23560 247 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 ETV5P41161 510 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 MFAP3P55082 362 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 KRTAP10-9P60411 292 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 CCT2P78371 535 aaKnown RBP7.26□□□□□ -1.25
CHD3-213ENST00000571249 ZNF177Q13360 481 aaPredicted RBP7.26□□□□□ -1.25
CHD3-213ENST00000571249 TMEM132DQ14C87 1099 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 ADCK5Q3MIX3 580 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 SV2CQ496J9 727 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 PRR30Q53SZ7 412 aaPredicted RBP7.26□□□□□ -1.25
CHD3-213ENST00000571249 EARS2Q5JPH6 523 aaKnown RBP7.26□□□□□ -1.25
CHD3-213ENST00000571249 HECTD3Q5T447 861 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 TMEM215Q68D42 235 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 VSTM1Q6UX27 236 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 SERPINA13PQ6UXR4 307 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 ZPBP2Q6X784 338 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 C4orf50Q6ZRC1 276 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms