RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 SMAD1Q15797 465 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 PKN2Q16513 984 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 ANKRD20A2Q5SQ80 823 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 ANKRD20A1Q5TYW2 823 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 ANKRD20A3Q5VUR7 823 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 CIR1Q86X95 450 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 CDKL3Q8IVW4 592 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 RNF168Q8IYW5 571 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 AGGF1Q8N302 714 aaeCLIP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 USP33Q8TEY7 942 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 QKIQ96PU8 341 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 EPAS1Q99814 870 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 ARHGEF38Q9NXL2 777 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 CHMP2BQ9UQN3 213 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 BPTFQ12830 3046 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 GOLGA6L7A0A1B0GV03 622 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 SLC12A8A0AV02 714 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 LCHNA4D1U4 455 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 CAPN15O75808 1086 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 RFC2P35250 354 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 KCNQ1P51787 676 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 TBX4P57082 545 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 SPARCL1Q14515 664 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 EFTUD2Q15029 972 aaKnown RBP eCLIP11.2□□□□□ -0.626e-8■■■■■ 27.7
SNRPA1-211ENST00000560433 PIK3R6Q5UE93 754 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 TRMT10CQ7L0Y3 403 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 TFAP2DQ7Z6R9 452 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 FBXO36Q8NEA4 188 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF512Q96ME7 567 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 AGAP3Q96P47 875 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 TLR8Q9NR97 1041 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 PAK5Q9P286 719 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 RCOR3Q9P2K3 495 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 SHOC2Q9UQ13 582 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 NEU3Q9UQ49 428 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF487B1APH4 448 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 RNF103O00237 685 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 RASGRF2O14827 1237 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 TLR5O60602 858 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 GJB5O95377 273 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 GLUD2P49448 558 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 TUBP50607 506 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 GPX6P59796 221 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 KCNJ11Q14654 390 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 ARHGEF18Q6ZSZ5 1173 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 CENPUQ71F23 418 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 PCGF5Q86SE9 256 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF461Q8TAF7 563 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 MYEOVQ96EZ4 313 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 SERPINB11Q96P15 392 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 UBP1Q9NZI7 540 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 MARCH2Q9P0N8 246 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 TTLL3Q9Y4R7 772 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 CEP290O15078 2479 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 E9PAM4 449 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 POC1B-GALNT4F8VUJ3 575 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 CNTN5O94779 1100 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 CREB1P16220 341 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 PSMB4P28070 264 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 ELK3P41970 407 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 AIF1P55008 147 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 CRADDP78560 199 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 GUCY1A3Q02108 690 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 WASHC5Q12768 1159 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 PLD1Q13393 1074 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 XRCC4Q13426 336 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 ARTNQ5T4W7 220 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 PID1Q7Z2X4 250 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 CYP4X1Q8N118 509 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF567Q8N184 647 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 PYROXD1Q8WU10 500 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 SERPINB12Q96P63 405 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 FAM129AQ9BZQ8 928 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 MCOLN1Q9GZU1 580 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 ALG13Q9NP73 1137 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 IL23AQ9NPF7 189 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 SPG21Q9NZD8 308 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 IL37Q9NZH6 218 aa11.19□□□□□ -0.62
SNRPA1-211ENST00000560433 FAM92AA1XBS5 289 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 KCNU1A8MYU2 1149 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 E7EVH7 732 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 TRDMT1O14717 391 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 USP12O75317 370 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 RTN3O95197 1032 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 NR1D1P20393 614 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 ARL4CP56559 192 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 DSG1Q02413 1049 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 AUHQ13825 339 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 PDK1Q15118 436 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 RAP1GAP2Q684P5 730 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 MPP5Q8N3R9 675 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 PDCD7Q8N8D1 485 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 MDM1Q8TC05 714 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 RTP4Q96DX8 246 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms