RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLC9C2Q5TAH2 1124 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 CACHD1Q5VU97 1274 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 PLAG1Q6DJT9 500 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 RINT1Q6NUQ1 792 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 SLC30A6Q6NXT4 461 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 USP38Q8NB14 1042 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 SEMA6DQ8NFY4 1073 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 OR1N1Q8NGS0 311 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 WDR60Q8WVS4 1066 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 RNF125Q96EQ8 232 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 ZMAT2Q96NC0 199 aaKnown RBP4.69□□□□□ -1.66
SCAF11-210ENST00000547654 SEMA4CQ9C0C4 833 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 TWSG1Q9GZX9 223 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 CHODLQ9H9P2 273 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 G6PC2Q9NQR9 355 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 NDUFAF4Q9P032 175 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 HESX1Q9UBX0 185 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 DERAQ9Y315 318 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 DTNAQ9Y4J8 743 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 RPGRIP1LQ68CZ1 1315 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 ZNF521Q96K83 1311 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 TDRD9Q8NDG6 1382 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 EFCAB8A8MWE9 144 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 E7EVH7 732 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 ZNF213O14771 459 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SPTLC2O15270 562 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 DKC1O60832 514 aaKnown RBP eCLIP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 DNTTP04053 509 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 CNPP09543 421 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 HSPA1AP0DMV8 641 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 HSPA1BP0DMV9 641 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 ACADMP11310 421 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 CYP2C9P11712 490 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SLC5A2P31639 672 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 CTNNA1P35221 906 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 ARL3P36405 182 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 PAFAH1B1P43034 410 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 NDUFV1P49821 464 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 NXPH1P58417 271 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SSBP2P81877 361 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SP2Q02086 613 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 GALNT2Q10471 571 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 GPS1Q13098 491 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 EIF4A2Q14240 407 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SMAD1Q15797 465 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 MORN5Q5VZ52 161 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 NAA35Q5VZE5 725 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 C11orf87Q6NUJ2 197 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 ZDHHC24Q6UX98 284 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SLC30A10Q6XR72 485 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 ZNF782Q6ZMW2 699 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 TMTC3Q6ZXV5 915 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 R3HCC1LQ7Z5L2 792 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 ANKS1BQ7Z6G8 1248 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 CPLX4Q7Z7G2 160 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 RPAP2Q8IXW5 612 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 NKAIN3Q8N8D7 197 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 FAM46DQ8NEK8 389 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 TBC1D22AQ8WUA7 517 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 MPHOSPH8Q99549 860 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SMOQ99835 787 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 BAG1Q99933 345 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SLF1Q9BQI6 1058 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 REEP2Q9BRK0 252 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SLC25A32Q9H2D1 315 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 GHITMQ9H3K2 345 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 FAM83DQ9H4H8 585 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 EIF2B3Q9NR50 452 aaKnown RBP4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SERTAD4Q9NUC0 356 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 DAPP1Q9UN19 280 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 CNPY2Q9Y2B0 182 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 SSX2IPQ9Y2D8 614 aa4.68□□□□□ -1.66
SCAF11-210ENST00000547654 GTPBP1O00178 669 aaKnown RBP4.67□□□□□ -1.66
SCAF11-210ENST00000547654 PPP6R2O75170 966 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 PIAS2O75928 621 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 RASAL1O95294 804 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 NTSR2O95665 410 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 APOA4P06727 396 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ANXA6P08133 673 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 HSP90AB1P08238 724 aaKnown RBP4.67□□□□□ -1.66
SCAF11-210ENST00000547654 CSF1P09603 554 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 EBLN1P0CF75 366 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 KLRK1P26718 216 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ABCD3P28288 659 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 EPHB2P29323 1055 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 SERPINA4P29622 427 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ACTN2P35609 894 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 PSMC2P35998 433 aaKnown RBP4.67□□□□□ -1.66
SCAF11-210ENST00000547654 PGM1P36871 562 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 VIPR2P41587 438 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 RBM5P52756 815 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ROR1Q01973 937 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 KRT17Q04695 432 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 TUBB3Q13509 450 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 KCNAB1Q14722 419 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 WTAPQ15007 396 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 CTXN3Q4LDR2 81 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 PLA1AQ53H76 456 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 TTC22Q5TAA0 569 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 FAM160B1Q5W0V3 765 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms