RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ARL4CP56559 192 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 IRX4P78413 519 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 ZBTB17Q13105 803 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 BFSP2Q13515 415 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 SLC45A4Q5BKX6 768 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 C6orf118Q5T5N4 469 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 KIAA1841Q6NSI8 718 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 RFWD3Q6PCD5 774 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 ZNF567Q8N184 647 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 PPM1NQ8N819 430 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 TEKT4Q8WW24 435 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 SEPT8Q92599 483 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 ZBTB24O43167 697 aaPredicted RBP12.32□□□□□ -0.44
CCDC38-202ENST00000546386 CNTN5O94779 1100 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 VIMP08670 466 aaKnown RBP12.32□□□□□ -0.44
CCDC38-202ENST00000546386 STIP1P31948 543 aaKnown RBP12.32□□□□□ -0.44
CCDC38-202ENST00000546386 MAXP61244 160 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 FAM189BP81408 668 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 C10orf120Q5SQS8 335 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 TLCD1Q96CP7 247 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 CCT8L2Q96SF2 557 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 TSEN34Q9BSV6 310 aaKnown RBP12.32□□□□□ -0.44
CCDC38-202ENST00000546386 VN1R3Q9BXE9 311 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 INTS9Q9NV88 658 aaKnown RBP12.32□□□□□ -0.44
CCDC38-202ENST00000546386 SMPD4Q9NXE4 827 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 KLHL8Q9P2G9 620 aaPredicted RBP12.32□□□□□ -0.44
CCDC38-202ENST00000546386 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 ATP9BO43861 1147 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 CYP11A1P05108 521 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 IRF1P10914 325 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 KCNQ1P51787 676 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 EIF3BP55884 814 aaKnown RBP12.31□□□□□ -0.44
CCDC38-202ENST00000546386 LRRC26Q2I0M4 334 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 CYP2S1Q96SQ9 504 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 GKN1Q9NS71 199 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 RABGEF1Q9UJ41 708 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 ALOX15BO15296 676 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 KRT4P19013 534 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 RPA3P35244 121 aaPredicted RBP12.31□□□□□ -0.44
CCDC38-202ENST00000546386 ETFBP38117 255 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 WASHC5Q12768 1159 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 KCNJ11Q14654 390 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 VSTM1Q6UX27 236 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 RNF135Q8IUD6 432 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 OR52K1Q8NGK4 314 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 FBXO32Q969P5 355 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 KLHL5Q96PQ7 755 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 PLAC1Q9HBJ0 212 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 SMYD2Q9NRG4 433 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 ZC3H7BQ9UGR2 993 aaKnown RBP12.31□□□□□ -0.44
CCDC38-202ENST00000546386 EFR3BQ9Y2G0 817 aa12.31□□□□□ -0.44
CCDC38-202ENST00000546386 ZBBXA8MT70 800 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 H3BRJ5 948 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 TGM2P21980 687 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 MGAT1P26572 445 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 TUBP50607 506 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 DPYSQ14117 519 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 ZNF534Q76KX8 674 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 AZIN2Q96A70 460 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 ZNF778Q96MU6 729 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 PAFAH2Q99487 392 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 SHOC2Q9UQ13 582 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 SKIP12755 728 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 GBP1P32455 592 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 PCSK7Q16549 785 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 ALFQ53S48 1182 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 MROH9Q5TGP6 573 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 RAP1GAP2Q684P5 730 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 PM20D1Q6GTS8 502 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 C4orf50Q6ZRC1 276 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 SLC13A1Q9BZW2 595 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 UNKQ9C0B0 810 aaKnown RBP12.3□□□□□ -0.44
CCDC38-202ENST00000546386 DNAI2Q9GZS0 605 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 KLC2Q9H0B6 622 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 ZCWPW1Q9H0M4 648 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 GRID1Q9ULK0 1009 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 VPS13AQ96RL7 3174 aa12.3□□□□□ -0.44
CCDC38-202ENST00000546386 A0A087WUV0 522 aaPredicted RBP12.29□□□□□ -0.44
CCDC38-202ENST00000546386 MTMR11A4FU01 709 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 DCLK1O15075 740 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 TRAPPC3O43617 180 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 OAZ2O95190 189 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 GJA1P17302 382 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 ATF6P18850 670 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 CAV1Q03135 178 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 CERCAMQ5T4B2 595 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 CPLX4Q7Z7G2 160 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 LRRC34Q8IZ02 419 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 BBOF1Q8ND07 529 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 FBXO22Q8NEZ5 403 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 PGM2Q96G03 612 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms