RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NRF1Q16656 503 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CENPIQ92674 756 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 PARK7Q99497 189 aaKnown RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 POLR1DQ9Y2S0 133 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CYB561D2O14569 222 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 NR3C2P08235 984 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 OXCT1P55809 520 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 SFSWAPQ12872 951 aaKnown RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 LPIN1Q14693 890 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CROTQ9UKG9 612 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 ANKRD6Q9Y2G4 727 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MBL2P11226 248 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 ITGALP20701 1170 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 RCVRNP35243 200 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 N4BP2L1Q5TBK1 243 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 USP7Q93009 1102 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 RIT2Q99578 217 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 SEMA6AQ9H2E6 1030 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 PLAGL2Q9UPG8 496 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 NAALADL1Q9UQQ1 740 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CLOCKO15516 846 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 RAB2AP61019 212 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 PDIA6Q15084 440 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CAVIN3Q969G5 261 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 VPS28Q9UK41 221 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CCDC182A6NF36 153 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 RAD51BO15315 384 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 MT-CO1P00395 513 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 FGFR1P11362 822 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 GARTP22102 1010 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 MAPK10P53779 464 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ITGADQ13349 1161 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ERMARDQ5T6L9 678 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 CYP20A1Q6UW02 462 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 EXOC3L1Q86VI1 746 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 KCNMB4Q86W47 210 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 CLYBLQ8N0X4 340 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ZNF184Q99676 751 aaPredicted RBP12.71□□□□□ -0.37
HCFC1-202ENST00000369984 EPB41L4AQ9HCS5 686 aaPredicted RBP12.71□□□□□ -0.37
HCFC1-202ENST00000369984 A1CFQ9NQ94 594 aaKnown RBP12.71□□□□□ -0.37
HCFC1-202ENST00000369984 TRPM5Q9NZQ8 1165 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 NCAM2O15394 837 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 THPOP40225 353 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 CASP4P49662 377 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 SBK1Q52WX2 424 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ITFG1Q8TB96 612 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 CPNE1Q99829 537 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 NUAK2Q9H093 628 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ZMYM5Q9UJ78 669 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 CAPN6Q9Y6Q1 641 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ABCA6Q8N139 1617 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ACADMP11310 421 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ITGB6P18564 788 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 CLK2P49760 499 aaKnown RBP12.71□□□□□ -0.37
HCFC1-202ENST00000369984 RALGDSQ12967 914 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 STK32CQ86UX6 486 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 MID1IP1Q9NPA3 183 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 TDRKHQ9Y2W6 561 aaKnown RBP12.71□□□□□ -0.37
HCFC1-202ENST00000369984 NUDT14O95848 222 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 NR2C2P49116 596 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 ADPRHL2Q9NX46 363 aa12.71□□□□□ -0.37
HCFC1-202ENST00000369984 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.38
HCFC1-202ENST00000369984 CRABP2P29373 138 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 MYBPC2Q14324 1141 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 INVSQ9Y283 1065 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 RIPK2O43353 540 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 SLC37A4O43826 429 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 POU5F1Q01860 360 aaKnown RBP12.71□□□□□ -0.38
HCFC1-202ENST00000369984 TRAP1Q12931 704 aaKnown RBP12.71□□□□□ -0.38
HCFC1-202ENST00000369984 PRKAA1Q13131 559 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 CYP2R1Q6VVX0 501 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 ATG9AQ7Z3C6 839 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 UCMAQ8WVF2 138 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 PROX1Q92786 737 aa12.71□□□□□ -0.38
HCFC1-202ENST00000369984 A0A0A6YYK5 440 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 WDR27A2RRH5 827 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 H3BMM5 538 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 KHDRBS3O75525 346 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 F9P00740 461 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 HLA-DQA2P01906 255 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ACADLP28330 430 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 GSTM5P46439 218 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 PTSQ03393 145 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 MZT2BQ6NZ67 158 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 B3GNT6Q6ZMB0 384 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 MTFMTQ96DP5 389 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 GRIP2Q9C0E4 1043 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 BTBD3Q9Y2F9 522 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms