RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 RPL26L1Q9UNX3 145 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 AP4S1Q9Y587 144 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ANKRD26Q9UPS8 1709 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 H0Y626 953 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 APOC4-APOC2K7ER74 178 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 TBC1D12O60347 775 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SOAT2O75908 522 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 APOC2P02655 101 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 EIF4BP23588 611 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 GRK2P25098 689 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 IFNA8P32881 189 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 DDX39BQ13838 428 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 MRNIPQ6NTE8 343 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 TLDC1Q6P9B6 456 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ADCK2Q7Z695 626 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ADCK1Q86TW2 530 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CLVS1Q8IUQ0 354 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 STKLD1Q8NE28 680 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SHC3Q92529 594 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 TLCD1Q96CP7 247 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 DGCR14Q96DF8 476 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SYT15Q9BQS2 421 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 NAT9Q9BTE0 207 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 PARVBQ9HBI1 364 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SLCO1B3Q9NPD5 702 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CYLDQ9NQC7 956 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CRLS1Q9UJA2 301 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 LSM7Q9UK45 103 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CAMTA1Q9Y6Y1 1673 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 BTNL10A8MVZ5 291 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 DCXO43602 365 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 F9P00740 461 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF23P17027 643 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 FECHP22830 423 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 RPL22P35268 128 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ATP6V1E1P36543 226 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 RGS4P49798 205 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SLC6A3Q01959 620 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 KRT72Q14CN4 511 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SNX17Q15036 470 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SPDYE7PQ495Y7 208 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC81Q6ZN84 652 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 RIPOR1Q6ZS17 1223 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 VSIG10LQ86VR7 867 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 KCNMB4Q86W47 210 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 PPP1R2P1Q96PQ5 205 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 APBA2Q99767 749 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 WWOXQ9NZC7 414 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 GPRC5DQ9NZD1 345 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 VAV3Q9UKW4 847 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 HES2Q9Y543 173 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 UBIAD1Q9Y5Z9 338 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 A0A096LPK6 155 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 TCRBV7S2A1N4TA0A589 114 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 VAPBO95292 243 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SERPINE1P05121 402 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC166P0CW27 439 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 HLA-DPA1P20036 260 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 PSMA4P25789 261 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CNTFP26441 200 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 HOXD10P28358 340 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SLC26A2P50443 739 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CDK7P50613 346 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 PLK1P53350 603 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 YWHAZP63104 245 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CDCA2Q69YH5 1023 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF333Q96JL9 665 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 BRD8Q9H0E9 1235 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ZFYVE28Q9HCC9 887 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 RRN3Q9NYV6 651 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ADGRA3Q8IWK6 1321 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 SLC12A8A0AV02 714 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 TGFB2P61812 414 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ARHGEF7Q14155 803 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 KHDC1Q4VXA5 237 aaKnown RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 POLNQ7Z5Q5 900 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 NET1Q7Z628 596 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PALB2Q86YC2 1186 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 SPATA16Q9BXB7 569 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PLGRKTQ9HBL7 147 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PACSIN3Q9UKS6 424 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 PNMA8BQ9ULN7 279 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 A0A0B4J269 797 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 SAC3D1A6NKF1 404 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 AVILO75366 819 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 USP1O94782 785 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 BAIAP3O94812 1187 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ALBP02768 609 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 TGFB3P10600 412 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 GP5P40197 560 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ADCYAP1R1P41586 468 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF177Q13360 481 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-202ENST00000343090 GTF2H3Q13889 308 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 NFYCQ13952 458 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 FAM183BPQ6ZVS7 135 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 C11orf74Q86VG3 221 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 FAM228AQ86W67 206 aa8.24□□□□□ -1.09
UBE4B-202ENST00000343090 ZSCAN18Q8TBC5 510 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms