RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 PTENP60484 403 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 CHRNB3Q05901 458 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 GRIK3Q13003 919 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 EARS2Q5JPH6 523 aaKnown RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 RETSATQ6NUM9 610 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 LZTR1Q8N653 840 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 OSCP1Q8WVF1 389 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 HNRNPLLQ8WVV9 542 aaKnown RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 ZBTB45Q96K62 511 aaPredicted RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 CYP39A1Q9NYL5 469 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 SOX13Q9UN79 622 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 MYOM1P52179 1685 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 RIPK2O43353 540 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 BMP10O95393 424 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 PYGMP11217 842 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 ZNF7P17097 686 aaPredicted RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 ATP6V1B2P21281 511 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 SOX6P35712 828 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 CDH8P55286 799 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 KLC1Q07866 573 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 N4BP2L1Q5TBK1 243 aaPredicted RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 PRMT9Q6P2P2 845 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 ZNF786Q8N393 782 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 ZNF606Q8WXB4 792 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 ARHGAP20Q9P2F6 1191 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 TRPC4Q9UBN4 977 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 POLG2Q9UHN1 485 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 RIC1Q4ADV7 1423 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 VPS4BO75351 444 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 RECQL4O94761 1208 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 UBA1P22314 1058 aaKnown RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 SEC24CP53992 1094 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 PRKAA2P54646 552 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 YWHAZP63104 245 aaKnown RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 BOP1Q14137 746 aaKnown RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 SETMARQ53H47 684 aaPredicted RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 CCDC149Q6ZUS6 474 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 VCPIP1Q96JH7 1222 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 TBCBQ99426 244 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 FBXO10Q9UK96 956 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 PCDHA3Q9Y5H8 950 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 MRPL42Q9Y6G3 142 aaKnown RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 TK2O00142 265 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 EML1O00423 815 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 DNALI1O14645 258 aaPredicted RBP8.9□□□□□ -0.99
PTCD3-201ENST00000254630 FYNP06241 537 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 NQO1P15559 274 aaKnown RBP8.9□□□□□ -0.99
PTCD3-201ENST00000254630 CALB2P22676 271 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 GCNT1Q02742 428 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 RCN1Q15293 331 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 PRAMEF19Q5SWL8 479 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 TPGS1Q6ZTW0 290 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 SKA1Q96BD8 255 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 ZSCAN32Q9NX65 697 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 VTI1BQ9UEU0 232 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 DNMT3LQ9UJW3 386 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 SLC15A5A6NIM6 579 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 FGF10O15520 208 aaPredicted RBP8.9□□□□□ -0.99
PTCD3-201ENST00000254630 PEX5P50542 639 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 CCT8P50990 548 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 DDR1Q08345 913 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 ARMC12Q5T9G4 340 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 FAM183BPQ6ZVS7 135 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 GPR142Q7Z601 462 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 FBXO39Q8N4B4 442 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 MTFMTQ96DP5 389 aaKnown RBP8.9□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF558Q96NG5 402 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 PIF1Q9H611 641 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 ACTR8Q9H981 624 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 FAM153AQ9UHL3 310 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 USP20Q9Y2K6 914 aa8.9□□□□□ -0.99
PTCD3-201ENST00000254630 CCDC154A6NI56 674 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 M0R3G1 203 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TYMPP19971 482 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 RASA2Q15283 850 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 GSTA3Q16772 222 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 FKBP1CQ5VVH2 108 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TMEM26Q6ZUK4 368 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 PALB2Q86YC2 1186 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 FBXL16Q8N461 479 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 CAVIN3Q969G5 261 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 VPS33AQ96AX1 596 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 NCKIPSDQ9NZQ3 722 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 PHLPP1O60346 1717 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 ADGRA3Q8IWK6 1321 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 A8MX80 341 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 PTPN1P18031 435 aaKnown RBP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 GRK2P25098 689 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 DEFA1P59665 94 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 DEFA3P59666 94 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 NR6A1Q15406 480 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 RBM43Q6ZSC3 357 aaKnown RBP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 KIAA2013Q8IYS2 634 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 OR56A4Q8NGH8 313 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 APOPT1Q96IL0 206 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 DPY30Q9C005 99 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 MFSD1Q9H3U5 465 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 A1CFQ9NQ94 594 aaKnown RBP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TBC1D23Q9NUY8 699 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms